Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1811 ATGGGTCTAAATCAGGAAGTAAAGGCACAGCCTGTCCAGGCTGATCCTAAAGATAAGGAAGTTCCTTCAGTGGAGGATCAAGAGGATGAGAAGACAGACAAGAAAAGACACTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACAACTGGTGGCCAGATACTCTTCCTAAGTGGTCAGGTTGATGAACGCACCATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGCTGGTATATGGCTTACATAATGGACACTAATGAAGAGGAGAGGGTTAAGGGCAAAACGGTTGAAGTTGGGAGAGCGCATTTTGAGACAGAAAAATCAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATTAGTGGTGCGGCTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGGGTGTCTAAGCTGGTTGTTGTGGTTAATAAGATGGATGAACCTACTGTGAAGTGGTCCAAAGAGAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAGGTCATCAGGCTACAATGTGAAGAAAGATGTCCTGTTTTTACCATTATCTGGCCTGACTGGTGCAAACATGAAAACAAGATTGGATAAAAGCACTTGTCCTTGGTGGGATGGCCCCTGCCTATTTGAAGTCCTTGATAGTGTTGACACTCCACCTCGAGATCCCAAAGGCCCTTTAAGGATGCCTATACTTGACAAATTCAAAGACATGGGTACTGTTGTTATGGGAAAAGTGGAATCTGGTACTGTCCGTGAAGGGGATTCCTTGTTGGTTATGCCCAATAAGGACCTTGTGAAAGTTGTTGCTGTGTTCATCGATGACGATAGGGTTAAACGTGCTGGACCTGGTGAGAATATACGGGTTAGAATATCTGGTGCTGAAGAAGAAGACATAGCAAGCGGGTTCATTCTGTCTAGTGTTGAAAATCCAATACCAGCTGCTACAGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCACATCCACTGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTACAGCAAATTGATCCAAAGACAAAGAAACCAATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCAGTTGTTGTCTGCCGAATTCAGGTTAATAATATGATATGCATTGAGAAATTCGCTGATTTGCCCCAACTTGGGAGGTTTACTCTTCGCACAGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGCTTTTAA 1386 0.4257 MGLNQEVKAQPVQADPKDKEVPSVEDQEDEKTDKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKSRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVVNKMDEPTVKWSKERYDEIESKMIPFLRSSGYNVKKDVLFLPLSGLTGANMKTRLDKSTCPWWDGPCLFEVLDSVDTPPRDPKGPLRMPILDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDLVKVVAVFIDDDRVKRAGPGENIRVRISGAEEEDIASGFILSSVENPIPAATEFVAQLQILELLDNAIFTAGYKAVLHIHCVVEECEIVELLQQIDPKTKKPMKKKPLFVKNGAVVVCRIQVNNMICIEKFADLPQLGRFTLRTEGKTVAVGKVTGF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1811 461 SUPERFAMILY Translation proteins 259 351 IPR009000 -
Prci1g1811 461 PANTHER TRANSLATION FACTOR 27 459 - -
Prci1g1811 461 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 91 106 IPR031157 -
Prci1g1811 461 CDD EF1_alpha 39 260 - -
Prci1g1811 461 FunFam Putative translation elongation/initiation factor family protein 353 461 - -
Prci1g1811 461 Pfam Elongation factor Tu C-terminal domain 352 459 IPR004160 -
Prci1g1811 461 CDD eRF3_C_III 353 459 - -
Prci1g1811 461 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 35 264 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 356 460 IPR009001 -
Prci1g1811 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 270 IPR027417 -
Prci1g1811 461 MobiDBLite consensus disorder prediction 1 33 - -
Prci1g1811 461 Gene3D Translation factors 354 461 - -
Prci1g1811 461 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 15 259 - -
Prci1g1811 461 Gene3D - 17 259 IPR027417 -
Prci1g1811 461 CDD eRF3_II 266 347 - -
Prci1g1811 461 Pfam Elongation factor Tu GTP binding domain 35 237 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 263 349 - -
Prci1g1811 461 PRINTS GTP-binding elongation factor signature 118 128 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 PRINTS GTP-binding elongation factor signature 39 52 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 PRINTS GTP-binding elongation factor signature 178 187 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 PRINTS GTP-binding elongation factor signature 134 145 IPR000795 GO:0003924|GO:0005525
Prci1g1811 461 MobiDBLite consensus disorder prediction 12 33 - -
Prci1g1811 461 Pfam Elongation factor Tu domain 2 279 345 IPR004161 GO:0005525
Prci1g1811 461 Gene3D Translation factors 264 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1811 Prci-Chr1 38492067 38504124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1811 34 456 Eukaryotic Initiation Factors Gene Family AT5G60390 37.559 1.55e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1811 K03267 - gmx:100784412 799.275