Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1808 ATGGCTCCTCGTGCCGCGAAAAACGACGAAGATGACCTCTCCTCCGGCGAAGACGATGACGGTTTCAAGGAGGACATGGAAGCCCTCGCACGAGCCTGCATGATCGCCGGCACTAACCCCGATGGTATTAAACCATCTTCTACTGTCGCTCCCGACGATGATTATAATGCAGACGCGGTGGTTCCCAAAGCATCGGACCCGCTGTTGGGCCCCGGCGATGCTCTCGTCCCCGTGTCAGACTCTGACGACGAGCAGAGGGACCTTCAGTATCTCAAAAGAGTGCAGGAGCTTTACCAGCCTTCGTCATTCAAGCCATTGAAAATTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGACATGGAAACCCTCCGTGCCATTATGAGACGCTTTTCTGCTTATGAAAGAGCAGGCCCTGATGAAGATAATGTGGATAAAATGGCTGAGGGAGCTCATACCTCAGGTCTAGGCTCTGAGGAGGAATTTGATAACAGCGTGGCATCTAAGGGATTAGATCCCGGTGAATCATGCCCTGTTTCTCAGGATGCTATTAAGACCACCAGTTTATTAACTACTGCTGAAGTTGAGAGACATCCTTGTAACATCAATGAAAGGTGTGAACCCAAGGCTTGCAAGCCATCCAAGTTACTGGACAAAAGATCAAGATTTCCTTTGTCTGCTCAGGTTTTTATTGATGCAATCAAGAAGAATAGATCTTTCCAGAAGTTACTGCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAAACAGTTAAGGGAAAGAGTTAAACTTCTTAAAGATTTTCAGGTTTCATGCATAAGAAGAACAGGGCAAGCTATATCACTGAAAAAGGATCCCCGCATACTGTTAATATCAGCAAAAAAGTCTACTGCTTCAAGTACCACAAAGATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAGTGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAATTTTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTCGTGTGGATATGCAAATAACTTTGATAACATGCTTGTATCTATTAAAGATCTTGAGATTACGCCAGAGAACATCAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTACTGGTCGTACTGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCATTGATCAATCATAGTCCATGGACAGTGAGGGAGGACAAGTTGCTTTTGCATATAATCCAAGAGATTGGCAATAGGGACTGGTTTAAAATTGCTGCATTGCTGAACACAAATAGGACCCCATTTCAGTGCTTGGCACGATACCAAAGGAGTTTAAATCCTGCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTATGCTGTCTCAATTTTTGGTGTCAGCAATTGGCAGTCTGTTGCTTCTGTTTTAGAACGAAGGACGGGAACTCAATGCTCTAATAGATGGAAGAAGTCACTCTGTCCTGATAGGAAAGGGAGCTTTACTGCAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATAGAATTTGTTCCTGGCCGGACCCAAGCTCAGTGCAGAGACAGATACGTCAATAGTTTGGATCCCTCCTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCAAGGTTGAAAAAAGCAATTGCCAAACATGGATTCTTCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATGTCCTGACCAAGTCCCTATGCTTCAAGAAGCTAGAAAGATGCAAAAATCTGCTTTAATCAGTAACTTTGTTGATCGGGAGTCTGAACGGCCGTGCCTTTCTCTAAATGATTTTCTTCCCTTGGCAATGATAGATCCACCACCTGATCCAGATGCTGTGTGA 2064 0.4409 MAPRAAKNDEDDLSSGEDDDGFKEDMEALARACMIAGTNPDGIKPSSTVAPDDDYNADAVVPKASDPLLGPGDALVPVSDSDDEQRDLQYLKRVQELYQPSSFKPLKILPALSLSDDDEDDMETLRAIMRRFSAYERAGPDEDNVDKMAEGAHTSGLGSEEEFDNSVASKGLDPGESCPVSQDAIKTTSLLTTAEVERHPCNINERCEPKACKPSKLLDKRSRFPLSAQVFIDAIKKNRSFQKLLRSKLIQMEAKIQENKQLRERVKLLKDFQVSCIRRTGQAISLKKDPRILLISAKKSTASSTTKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSSVERENLAKGIKQQFQEILLQMSINQDSSEWSCGYANNFDNMLVSIKDLEITPENIRKFLPEFNWDQLASKYVTGRTGAECEARWLNCEDPLINHSPWTVREDKLLLHIIQEIGNRDWFKIAALLNTNRTPFQCLARYQRSLNPAMLNSEWTEEEDAQLCYAVSIFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTAEEDERLTVAVHLFGRKWNQIAXFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFFWSKVAADVPPRTDSQCRKRWRVLCPDQVPMLQEARKMQKSALISNFVDRESERPCLSLNDFLPLAMIDPPPDPDAV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1808 688 Gene3D - 437 487 - -
Prci1g1808 688 ProSiteProfiles Myb-like domain profile. 484 535 IPR001005 -
Prci1g1808 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 492 539 IPR017930 -
Prci1g1808 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 431 487 IPR017930 -
Prci1g1808 688 Gene3D - 490 538 - -
Prci1g1808 688 MobiDBLite consensus disorder prediction 1 82 - -
Prci1g1808 688 ProSiteProfiles Myb-like domain profile. 586 636 IPR001005 -
Prci1g1808 688 ProSiteProfiles Myb-like domain profile. 431 483 IPR001005 -
Prci1g1808 688 Coils Coil 245 265 - -
Prci1g1808 688 SUPERFAMILY Homeodomain-like 565 639 IPR009057 -
Prci1g1808 688 Gene3D - 539 591 - -
Prci1g1808 688 Gene3D - 333 436 - -
Prci1g1808 688 CDD SANT 438 483 IPR001005 -
Prci1g1808 688 SUPERFAMILY Homeodomain-like 411 480 IPR009057 -
Prci1g1808 688 ProSiteProfiles Myb-like domain profile. 539 585 IPR001005 -
Prci1g1808 688 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 686 - -
Prci1g1808 688 CDD SANT 594 635 IPR001005 -
Prci1g1808 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 586 640 IPR017930 -
Prci1g1808 688 SUPERFAMILY Homeodomain-like 488 581 IPR009057 -
Prci1g1808 688 CDD SANT 542 585 IPR001005 -
Prci1g1808 688 CDD SANT 491 535 IPR001005 -
Prci1g1808 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 540 580 IPR017930 -
Prci1g1808 688 SMART sant 590 638 IPR001005 -
Prci1g1808 688 SMART sant 336 432 IPR001005 -
Prci1g1808 688 SMART sant 488 537 IPR001005 -
Prci1g1808 688 SMART sant 435 485 IPR001005 -
Prci1g1808 688 SMART sant 539 587 IPR001005 -
Prci1g1808 688 Pfam Myb-like DNA-binding domain 439 500 - -
Prci1g1808 688 Pfam Myb-like DNA-binding domain 543 602 - -
Prci1g1808 688 Gene3D - 592 638 - -
Prci1g1808 688 ProSiteProfiles SANT domain profile. 538 583 IPR017884 -
Prci1g1808 688 MobiDBLite consensus disorder prediction 139 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1808 222 688 MYB-Related Transcription Factor Family AT3G18100 53.734 8.83e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1g1808 Myb_DNA-bind_6 5.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1808 K09422 - gmx:778073 819.69