LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1803	ATGGGTGGCGGAACGACACTGGTGGACGGGATTCGTCGCCTTTTTCAACGTCGACCTTCTTCTGCAATCAAGTCCTCTGATGACGAGCCTAGTCACGATCATAACTATCACAATGCCGATCGTATTGCTAGTACCAACCATAGCCACAAGCTCGTGAGAGATTTACGCGCTCAATTAGCTACTATTCCCAGACAGGAGAGAGAAGAAGGCGAGGAGGCCGAAGACGGGTTCGCGATTGAGGATGATTTTGATATCTCTGGCTTGAAGCATATCAAGGTTCCCACACGGGCGTTCTTCAAAGCTGCTTCTATGGATCCTTCTAAGAAGGGCACTCCAGAAACAGAGTTCTTCACTGAGTATGGAGAGGCAAGCCAATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTCGTAGGTTCTGCAATTGATGCTCGTACGGGGGAAAGGGTTGCGATTAAGAAAATTAATGATGTATTTGAGCATGTCTCTGATGCCACAAGGATCCTAAGAGAAATCAAACTCCTTCGGCTGCTCCGGCATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCAAGGAGAGAGTTCAAGGATATCTATGTTGTGTTTGAGCTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAATGATGATCTTACACCTGAGCACCACCAATTTTTTTTGTACCAACTTCTTCGAGGCCTGAAATATATACATTCCGCGAATGTGTTTCATCGTGACTTAAAGCCCAAAAATATTCTCGCCAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCGCCTTCTGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCGCCAGAATTATGTGGCTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATCGGATGCATATTTGCGGAAATGCTCTCCGGGAAGCCATTATTTCCCGGTAAAAATGTGGTGCACCAATTGGATTTGATGACTGATTTACTTGGTACTCCTCCTGCTGAAACCATTTCGAGGATTCGTAATGAGAAGGCTAGAAGGTACCTTAGTAACATGCGGAAAAAGCAATCAGTTCCACTTTCTCAAAAGTTTCCTTATGCAGATCCATTGGCCCTTCGTCTACTGGAACGCCTACTTGCATTTGATCCTAAAGATCGTCCTTCCGCTGAAGAGGCATTAAGTGATCCTTATTTCCGCGGTTTGGCGAACGTTGAGCGTGAACCTGCATCTCCTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACTAAAGAGGACATTCTAGAGTATCATCCTCAAATGCTTCAGGAATATCTGCGTGGTGGAGATCAGACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCACTACGGCAAAGGTGAACGAAGCACTCCTTTGCAGAGACAGCATGCCTCTTTGCCTAGAGAACGAGTGCCTGCTCTGAAGGATGAAGCTGGTCGAGACAATGACTTTGAAAGGCGAACCAATGCAGCTGTAGCAACAACTCTTCACAGTCCTGATGGGACTGAAGCTGCACAAAATGGACCCTCCAAGCCAGACCAAGGTACACGTAGCCTGTTGAAGAGTGCCAGCATCAGTGCTTCCAAATGTGTAGGTGAGAAGCCAAGTAACGGTCTAGAGGATGAGCCTATTGAAGAGGTGAATGATGAGGAAGGAGAGGGATTGCCAGTTCATGCTTAG	1800	0.4522	MGGGTTLVDGIRRLFQRRPSSAIKSSDDEPSHDHNYHNADRIASTNHSHKLVRDLRAQLATIPRQEREEGEEAEDGFAIEDDFDISGLKHIKVPTRAFFKAASMDPSKKGTPETEFFTEYGEASQYQVQEVIGKGSYGVVGSAIDARTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAETISRIRNEKARRYLSNMRKKQSVPLSQKFPYADPLALRLLERLLAFDPKDRPSAEEALSDPYFRGLANVEREPASPQPISKLEFEFERRKLTKEDILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVPALKDEAGRDNDFERRTNAAVATTLHSPDGTEAAQNGPSKPDQGTRSLLKSASISASKCVGEKPSNGLEDEPIEEVNDEEGEGLPVHA	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1803	599	Pfam	Protein kinase domain	126	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1803	599	Gene3D	Transferase(Phosphotransferase) domain 1	210	445	-	-
	Prci1g1803	599	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	125	463	-	-
	Prci1g1803	599	ProSitePatterns	MAP kinase signature.	161	264	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Prci1g1803	599	MobiDBLite	consensus disorder prediction	1	48	-	-
	Prci1g1803	599	MobiDBLite	consensus disorder prediction	508	527	-	-
	Prci1g1803	599	MobiDBLite	consensus disorder prediction	22	48	-	-
	Prci1g1803	599	CDD	STKc_TDY_MAPK	125	455	-	-
	Prci1g1803	599	SMART	serkin_6	126	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1803	599	FunFam	Mitogen-activated protein kinase	115	220	-	-
	Prci1g1803	599	FunFam	Mitogen-activated protein kinase	212	441	-	-
	Prci1g1803	599	MobiDBLite	consensus disorder prediction	528	571	-	-
	Prci1g1803	599	ProSitePatterns	Protein kinases ATP-binding region signature.	132	156	IPR017441	GO:0005524
	Prci1g1803	599	MobiDBLite	consensus disorder prediction	490	599	-	-
	Prci1g1803	599	SUPERFAMILY	Protein kinase-like (PK-like)	122	422	IPR011009	-
	Prci1g1803	599	Gene3D	Phosphorylase Kinase; domain 1	124	450	-	-
	Prci1g1803	599	ProSiteProfiles	Protein kinase domain profile.	126	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1803	Prci-Chr1	38337255	38345006	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1803	1	586	MAP Kinase Gene Family	AT1G73670	69.000	0.0	812

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Prci1g1803		Pkinase	7.1e-68	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1803	-		-	zju:107434116	882.863