Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1800 ATGCCTCCCCTCGTAGATCTGCAAGGGACGTCAATCTCAGATAGTGTCACATGGGAAGCAGTCTTAGTCAATAGGGCTGCCGATTCTAATTTGTTAAAACTTGAGCAAAAAGCTTTAGAGCTGGCAAGCAAGTCAAGATTAGAAATTGAAATAGTAGCAAATGGTAATTTGGTGCAGAAGCTTGCCGTATTAGTGGCTGACTATATGGGTGGACCGGTTGCAGATCCTCAACATATGACAAGTGCGTGGCAGAGTCTTAGTTATAGCTTGAAATCAACCCTTGGCAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCACGGCACCGTGCATTGCTATTTAAGGTTTTAGCTGATTGTGTGGGTGTTCCTTGTCGGATGGTCAAAGGACAGCAATACACGGGTTCTGATGGTGTGGCAATGAACTTCATCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCTGATCCTGGAACACTTATTCCAGCTGATGCAACTGGATCGCATGTTGAGTTTAACGAACCTATATTTTCAGCCACTCCTACAACAGGAGTTGATTCGTCTCCTGCAACATTGTCTGGCAGAGGTATTGGAAGTTCAATGGAAGGAGCTTCAGACTCTGGGGCATTGGACAATTCAAATAAATCAAAGCAGTTTGCCTATGCAGGATCTGAAAAAAGCAGGCCCGCTCCTGGCAAGGAAGAATCAAAAAGACACTTGTATACTTTCAAGAGTCCCGTCAATGTTGAGAAGATTGCGCTAGAAACTCCCAGTAGGCCTAATTATACACATGGACATGCAAGATCACCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTTCGTAGAATGAAGGTTAAAGATGTTTCACAATATATGATGGATGCTGCCAAAGATAATCCTAACTTGGCTCAGAAGCTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAGATTTATAATGAGCAACTTGATGCTCCATCACTGACTGAAGAAAAAGACGAACCTAAACAGGAGATTGTCCAGCAAGAAACTCAGGTTGCTGATAACCTAGGCCCTGTTCAAATTTTGCCTCCTTTGCCTCACTACAGATTTCATCCCAAAGCCAGTACCAGCAGTCAGCCTGAGCCTTCTAAGCCTGTAGAAGGTTTAGGGGCCAACCTTACTCTTGATGCAAGGGAAGCAGCTGGTCAGCACATACCATCACAAGAAGAAGCTGGTCCTGTGAAATATGGGAAAAATGTCCCAGTTGCTGCAGCAGCAGCTGCTGCTGCAGCTGTTGTTGCATCTTCCATGGTAGTTGCTGTGGCAAAGTCAAGCAGTGACTCAAAAATTGAGCTTCCTGTGGCAGCTGCTGCAGCTGTTGTTGCAACCACTGCAGCTGTCAGTAAACAGTATGAGCAGGGAAGTCGAAGTGATGGAGATACAGATGGTGTTTATGAGCCAAAGGGTAGTGGTGATGGAGAGCATGTTAATTTAGGGGAAAACACAGGTGAGAGAATATCTGATAAATCAGTAAGTAATGAAAGCACAAAATCTGATCCTGCACTAGATGATGTTGCTGAATATGAGATTCCATGGGAGGAAATGGTGCTGGGTGAGCGTATTGGACTTGGATCATATGGGGAGGTGTACCATGGTGAATGGAGAGGAACTGAAGTTGCTGTAAAAAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGCGAGGTTCAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGTCCTCCGAATCTTTCCATTGTTACAGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGACCTAACAACCAATTAGACGAGCGAAGGCGATTGAGGATGGCCCTTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCTCTCCAATGATAGTCCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTTTGAAGGTTTGCGATTTTGGGTTATCACGAATGAAGCATAGTACATTCCTCTCTTCCAGATCAACTGCTGGGACTGCGGAGTCGATGGCTCCAGAAGTGTTAAGAAATGAACCTTCAGATGAAAAGTGTGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCATGACGCTGCAGCAGCCGTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGCCGTCTTGACATTCCTGACAATATGGACCCTGCTGTTGCTGATATTATCTGGAAATGCTGGCAGACAGATCCAAGGCTGAGACCCACATTTGCCGAGATCATGGCTGCACTGAAGCCGTTACAGAAGCCGATTGTCGGTTCTCATGTGGCCAAGTCTGGTGCACAGTCAAAGCGAGTTGCAGAAGATGCAGCAGGATGA 2469 0.4467 MPPLVDLQGTSISDSVTWEAVLVNRAADSNLLKLEQKALELASKSRLEIEIVANGNLVQKLAVLVADYMGGPVADPQHMTSAWQSLSYSLKSTLGSMVLPLGSLTIGLARHRALLFKVLADCVGVPCRMVKGQQYTGSDGVAMNFIKIDDGREYIVDLMADPGTLIPADATGSHVEFNEPIFSATPTTGVDSSPATLSGRGIGSSMEGASDSGALDNSNKSKQFAYAGSEKSRPAPGKEESKRHLYTFKSPVNVEKIALETPSRPNYTHGHARSPSWTEGISSPAVRRMKVKDVSQYMMDAAKDNPNLAQKLHDVLLESGVVAPPNLFSEIYNEQLDAPSLTEEKDEPKQEIVQQETQVADNLGPVQILPPLPHYRFHPKASTSSQPEPSKPVEGLGANLTLDAREAAGQHIPSQEEAGPVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSSDSKIELPVAAAAAVVATTAAVSKQYEQGSRSDGDTDGVYEPKGSGDGEHVNLGENTGERISDKSVSNESTKSDPALDDVAEYEIPWEEMVLGERIGLGSYGEVYHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVLKVCDFGLSRMKHSTFLSSRSTAGTAESMAPEVLRNEPSDEKCDVYSFGVILWELMTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAVADIIWKCWQTDPRLRPTFAEIMAALKPLQKPIVGSHVAKSGAQSKRVAEDAAG 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1800 822 MobiDBLite consensus disorder prediction 267 281 - -
Prci1g1800 822 PRINTS Tyrosine kinase catalytic domain signature 616 629 IPR001245 GO:0004672|GO:0006468
Prci1g1800 822 PRINTS Tyrosine kinase catalytic domain signature 765 787 IPR001245 GO:0004672|GO:0006468
Prci1g1800 822 PRINTS Tyrosine kinase catalytic domain signature 655 673 IPR001245 GO:0004672|GO:0006468
Prci1g1800 822 PRINTS Tyrosine kinase catalytic domain signature 721 743 IPR001245 GO:0004672|GO:0006468
Prci1g1800 822 Pfam Protein tyrosine and serine/threonine kinase 543 794 IPR001245 GO:0004672|GO:0006468
Prci1g1800 822 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 279 802 - -
Prci1g1800 822 CDD STKc_MAP3K-like 548 794 - -
Prci1g1800 822 ProSitePatterns Protein kinases ATP-binding region signature. 548 569 IPR017441 GO:0005524
Prci1g1800 822 MobiDBLite consensus disorder prediction 482 496 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 475 527 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 182 246 - -
Prci1g1800 822 FunFam Serine/threonine-protein kinase CTR1 621 804 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 340 365 - -
Prci1g1800 822 Pfam Ethylene-responsive protein kinase Le-CTR1 1 166 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 182 226 - -
Prci1g1800 822 SMART serkin_6 542 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1800 822 Gene3D Phosphorylase Kinase; domain 1 535 619 - -
Prci1g1800 822 ProSiteProfiles Protein kinase domain profile. 542 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1800 822 MobiDBLite consensus disorder prediction 374 393 - -
Prci1g1800 822 Gene3D Transferase(Phosphotransferase) domain 1 621 804 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 259 281 - -
Prci1g1800 822 MobiDBLite consensus disorder prediction 510 526 - -
Prci1g1800 822 SUPERFAMILY Protein kinase-like (PK-like) 523 793 IPR011009 -
Prci1g1800 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Prci1g1800 822 FunFam Serine/threonine-protein kinase isoform 1 533 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1800 Prci-Chr1 38265761 38274791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1800 1 808 MAP Kinase Kinase Kinase AT1G73660 63.482 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g1800 PK_Tyr_Ser-Thr 3.4e-64 CL0016