Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1798 ATGAAGAACATTCTCAAGAAGCTTCATATCATGCCCCATCAATCAGAAGATACTGAAGGGTCTACTTCATCAAGAGGAAGCAAGTCCCACGATGGTTCATCCCCTAAGAAGCTTTCTCACTCTCGGTCTCCTCAAGTTCCTGAGAATAAACCCTTTTCAGGGCTCTCGAATTGGTTGCATGCAGTTGCGAATAAGCAGAGTCCCAGTTCTCCATCTTCGAACCTCACAAGAGGAGAGAGAACAGAACCGTCTGATTCAATGAGCAGTGGTGGTCTGGACACTGTTTCTGATTCTGCGAGGTGTGATACAGCTTCTAGCACTTCGAAGGATCCTGAAATCGAGGAAGAGTATCAGATTCAACTGGCTTTAGAGTTGAGTGCAAAGGAGGATCCTGAGGCCGTGCAAATTGAAGCTGTCAAGCAAATCAGTTTAGGCTCTTGTGACCCTGACAATACACCTGCTGAAGTTGTGGCCTATCGATACTGGAATTACAATGCTCTTGGGTATGATGACAAGATTTTAGATGGTTTCTATGACCTTTATGGGATCTTGACTGAGTCGACCTCTGCAAGAATGCCTCCCCTCGTAGATCTGCAAGGGACGTCAATCTCAGATAGTGTCACATGGGAAGCAGTCTTAGTCAATAGGGCTGCCGATTCTAATTTGTTAAAACTTGAGCAAAAAGCTTTAGAGCTGGCAAGCAAGTCAAGATTAGAAATTGAAATAGTAGCAAATGGTAATTTGGTGCAGAAGCTTGCCGTATTAGTGGCTGACTATATGGGTGGACCGGTTGCAGATCCTCAACATATGACAAGTGCGTGGCAGAGTCTTAGTTATAGCTTGAAATCAACCCTTGGCAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCACGGCACCGTGCATTGCTATTTAAGGTTTTAGCTGATTGTGTGGGTGTTCCTTGTCGGATGGTCAAAGGACAGCAATACACGGGTTCTGATGGTGTGGCAATGAACTTCATCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCTGATCCTGGAACACTTATTCCAGCTGATGCAACTGGATCGCATGTTGAGTTTAACGAACCTATATTTTCAGCCACTCCTACAACAGGAGTTGATTCGTCTCCTGCAACATTGTCTGGCAGAGGTATTGGAAGTTCAATGGAAGGAGCTTCAGACTCTGGGGCATTGGACAATTCAAATAAATCAAAGCAGTTTGCCTATGCAGGATCTGAAAAAAGCAGGCCCGCTCCTGGCAAGGAAGAATCAAAAAGACACTTGTATACTTTCAAGAGTCCCGTCAATGTTGAGAAGATTGCGCTAGAAACTCCCAGTAGGCCTAATTATACACATGGACATGCAAGATCACCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTTCGTAGAATGAAGGTTAAAGATGTTTCACAATATATGATGGATGCTGCCAAAGATAATCCTAACTTGGCTCAGAAGCTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAGATTTATAATGAGCAACTTGATGCTCCATCACTGACTGAAGAAAAAGACGAACCTAAACAGGAGATTGTCCAGCAAGAAACTCAGGTTGCTGATAACCTAGGCCCTGTTCAAATTTTGCCTCCTTTGCCTCACTACAGATTTCATCCCAAAGCCAGTACCAGCAGTCAGCCTGAGCCTTCTAAGCCTGTAGAAGGTTTAGGGGCCAACCTTACTCTTGATGCAAGGGAAGCAGCTGGTCAGCACATACCATCACAAGAAGAAGCTGGTCCTGTGAAATATGGGAAAAATGTCCCAGTTGCTGCAGCAGCAGCTGCTGCTGCAGCTGTTGTTGCATCTTCCATGGTAGTTGCTGTGGCAAAGTCAAGCAGTGACTCAAAAATTGAGCTTCCTGTGGCAGCTGCTGCAGCTGTTGTTGCAACCACTGCAGCTGTCAGTAAACAGTATGAGCAGGGAAGTCGAAGTGATGGAGATACAGATGGTGTTTATGAGCCAAAGGGTAGTGGTGATGGAGAGCATGTTAATTTAGGGGAAAACACAGGATCATATGGGGAGGTGTACCATGGTGAATGGAGAGGAACTGAAGTTGCTGTAAAAAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGCGAGGTTCAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGTCCTCCGAATCTTTCCATTGTTACAGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGACCTAACAACCAATTAGACGAGCGAAGGCGATTGAGGATGGCCCTTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCTCTCCAATGATAGTCCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTTTGAAGGTTTGCGATTTTGGGTTATCACGAATGAAGCATAGTACATTCCTCTCTTCCAGATCAACTGCTGGGACTGCGGAGTCGATGGCTCCAGAAGTGTTAAGAAATGAACCTTCAGATGAAAAGTGTGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCATGACGCTGCAGCAGCCGTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGCCGTCTTGACATTCCTGACAATATGGACCCTGCTGTTGCTGATATTATCTGGAAATGCTGGCAGACAGATCCAAGGCTGAGACCCACATTTGCCGAGATCATGGCTGCACTGAAGCCGTTACAGAAGCCGATTGTCGGTTCTCATGTGGCCAAGTCTGGTGCACAGTCAAAGCGAGTTGCAGAAGATGCAGCAGGATGA 2919 0.4498 MKNILKKLHIMPHQSEDTEGSTSSRGSKSHDGSSPKKLSHSRSPQVPENKPFSGLSNWLHAVANKQSPSSPSSNLTRGERTEPSDSMSSGGLDTVSDSARCDTASSTSKDPEIEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESTSARMPPLVDLQGTSISDSVTWEAVLVNRAADSNLLKLEQKALELASKSRLEIEIVANGNLVQKLAVLVADYMGGPVADPQHMTSAWQSLSYSLKSTLGSMVLPLGSLTIGLARHRALLFKVLADCVGVPCRMVKGQQYTGSDGVAMNFIKIDDGREYIVDLMADPGTLIPADATGSHVEFNEPIFSATPTTGVDSSPATLSGRGIGSSMEGASDSGALDNSNKSKQFAYAGSEKSRPAPGKEESKRHLYTFKSPVNVEKIALETPSRPNYTHGHARSPSWTEGISSPAVRRMKVKDVSQYMMDAAKDNPNLAQKLHDVLLESGVVAPPNLFSEIYNEQLDAPSLTEEKDEPKQEIVQQETQVADNLGPVQILPPLPHYRFHPKASTSSQPEPSKPVEGLGANLTLDAREAAGQHIPSQEEAGPVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSSDSKIELPVAAAAAVVATTAAVSKQYEQGSRSDGDTDGVYEPKGSGDGEHVNLGENTGSYGEVYHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVLKVCDFGLSRMKHSTFLSSRSTAGTAESMAPEVLRNEPSDEKCDVYSFGVILWELMTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAVADIIWKCWQTDPRLRPTFAEIMAALKPLQKPIVGSHVAKSGAQSKRVAEDAAG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1798 972 MobiDBLite consensus disorder prediction 373 437 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 373 417 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 531 556 - -
Prci1g1798 972 Gene3D Phosphorylase Kinase; domain 1 693 769 - -
Prci1g1798 972 ProSiteProfiles Protein kinase domain profile. 692 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1798 972 MobiDBLite consensus disorder prediction 673 687 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 59 106 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 15 29 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 1 114 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 666 696 - -
Prci1g1798 972 CDD STKc_MAP3K-like 696 944 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 565 584 - -
Prci1g1798 972 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 90 952 - -
Prci1g1798 972 SMART serkin_6 694 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1798 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Prci1g1798 972 Pfam Protein tyrosine and serine/threonine kinase 700 944 IPR001245 GO:0004672|GO:0006468
Prci1g1798 972 SUPERFAMILY Protein kinase-like (PK-like) 700 943 IPR011009 -
Prci1g1798 972 MobiDBLite consensus disorder prediction 38 52 - -
Prci1g1798 972 Gene3D Transferase(Phosphotransferase) domain 1 771 954 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 450 472 - -
Prci1g1798 972 FunFam Serine/threonine-protein kinase isoform 1 691 770 - -
Prci1g1798 972 PRINTS Tyrosine kinase catalytic domain signature 871 893 IPR001245 GO:0004672|GO:0006468
Prci1g1798 972 PRINTS Tyrosine kinase catalytic domain signature 766 779 IPR001245 GO:0004672|GO:0006468
Prci1g1798 972 PRINTS Tyrosine kinase catalytic domain signature 805 823 IPR001245 GO:0004672|GO:0006468
Prci1g1798 972 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672|GO:0006468
Prci1g1798 972 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
Prci1g1798 972 FunFam Serine/threonine-protein kinase CTR1 771 954 - -
Prci1g1798 972 MobiDBLite consensus disorder prediction 458 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1798 Prci-Chr1 38265761 38276122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1798 1 958 MAP Kinase Kinase Kinase AT1G73660 59.409 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g1798 PK_Tyr_Ser-Thr 3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1798 - - gmx:100778331 1361.28