Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1787 ATGTGGATGGTGGGTTATAATGAAGGGAGTGATTTCAACATGCCTGATCATGCATTCAATGGAAGGAAGCTCAGGCCTTTAGTTCCTAGGCCACTGGCTTCACCTATAGCTCATCATGCTACAGATTTCTTTACACAGTGTCACAATCTGGCATCAGTGGTAGATCAAAGCAAGAGACCAGAATTCAACAATACTCCACCAGTTGTGGTGAGCACAAGGTGGAATCCTACCCCGGAGCAGCTGAGAGCTCTGGAAGAGTTATATCGGAGAGGGACAAGAACGCCATCTGCAGAGCAAATTCAGCATATCACTGCACAGCTTCGCAGGTTTGGGAAAATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGAGAGAGGCAGAAACGACGCCGTCAAGTGGAATCAGCTGCTGAGGGTCACACCTATGATCTTGATGCTCTAGAAAAGAAGGACTTAGGCGCAAGTAGGACAGCGTTTGAAGTTGAACAGACCAGCAAGAACTGGGCACCCTCTACAAACTGCAGTGCCACTCTTGCAGAGGAATCTGTCTCAATACAAAGAGCAGCAAAAGCAGCAGCAGCTGCAGCAGTTGCAGAGTGTAGAACAGATGGATGGGTTCAATTCAATGAAGGAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCAGATGATCCAGCCATCTTGTCCTCCCCCTACAGCTGCTGCTACCACTGCTCCCTCTACAACTAGCAATATTGCTACTGATACAGTCACAGGAATGGACCCAAAGCTCTCCAAGAACCATTGTGATCTGAGCTTTTTCATTTGTCATCCTCACAACACACAAAATGGTGTTATCCACTCCAACCGTGGGATCCTCAGGGAAGAAGATGATCTCAACAACCATGTGGAATCCCAAACCCTACAACTTTTCCCACTGAGGAGTGGAGGAGATGGCTGCAATAATAACATTAAGCAGAAGGAGACAGAGATTTCAGTATCCGCCATGGATTCCAACTTGACCCCAAGCCAGTTCTATGAGTTCCTTCCATTAAAGAACTAA 1068 0.4625 MWMVGYNEGSDFNMPDHAFNGRKLRPLVPRPLASPIAHHATDFFTQCHNLASVVDQSKRPEFNNTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESAAEGHTYDLDALEKKDLGASRTAFEVEQTSKNWAPSTNCSATLAEESVSIQRAAKAAAAAAVAECRTDGWVQFNEGELQQRRNFMERNATWQMIQPSCPPPTAAATTAPSTTSNIATDTVTGMDPKLSKNHCDLSFFICHPHNTQNGVIHSNRGILREEDDLNNHVESQTLQLFPLRSGGDGCNNNIKQKETEISVSAMDSNLTPSQFYEFLPLKN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1787 355 FunFam WUSCHEL-related homeobox 4 71 138 - -
Prci1g1787 355 ProSiteProfiles 'Homeobox' domain profile. 77 132 IPR001356 GO:0003677
Prci1g1787 355 Pfam Homeodomain 72 131 IPR001356 GO:0003677
Prci1g1787 355 SUPERFAMILY Homeodomain-like 72 136 IPR009057 -
Prci1g1787 355 SMART HOX_1 69 136 IPR001356 GO:0003677
Prci1g1787 355 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 59 350 IPR044555 GO:0003700|GO:0099402
Prci1g1787 355 CDD homeodomain 72 133 IPR001356 GO:0003677
Prci1g1787 355 Gene3D - 70 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1787 Prci-Chr1 38179761 38182450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1787 1 355 Wox Gene Family AT3G18010 39.332 1.33e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci1g1787 Homeodomain 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1787 - - gmx:100777274 446.817