Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1782 ATGGCCGACTCACCCAGTGAACCTGGCCTTCCTCACTTGGACCAAATGCTTGGCCTTCTCAGGGTTCACATCAAGCGTGGTGTCAATCTCGCTGTTCGTGATGTTCGCAGCAGCGATCCTTACATCGTCGTCAGGATGGGCAAGCAGAAACTCAAGACTCGCGTTATTGACAAGGATATTAATCCTGAGTGGGATGAAGAGCTTACGCTTTCTGTCGTGGACCCAAAGCTTCCAGTAACATTGACTGTGTATGACCATGATACTTGGAGCCCAGATGACCCAATGGGAGATGCTGAATTTGATATCATTCCATTTCTAGAAGCCTTGGGGATGCAGGTATCAAACCTCCCGAACGGTACAATTATAACAAGAGTACAACCAACCAGGCAAAACTGCCTAGCAGAGGAAAGCTGCATTGTTTTTAACGATGGCAAGATCACCCAAGATATGGCCCTCAGATTGCGACACGTGGAAAGTGGTGAAGTGGAAATCCAATTGCAATGGATTGAGCTTCCAGGTGCAAAGTAG 528 0.4773 MADSPSEPGLPHLDQMLGLLRVHIKRGVNLAVRDVRSSDPYIVVRMGKQKLKTRVIDKDINPEWDEELTLSVVDPKLPVTLTVYDHDTWSPDDPMGDAEFDIIPFLEALGMQVSNLPNGTIITRVQPTRQNCLAEESCIVFNDGKITQDMALRLRHVESGEVEIQLQWIELPGAK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1782 175 CDD C2_ArfGAP 17 160 - -
Prci1g1782 175 Gene3D C2 domain 15 172 IPR035892 -
Prci1g1782 175 ProSiteProfiles C2 domain profile. 4 118 IPR000008 -
Prci1g1782 175 Pfam C2 domain 18 102 IPR000008 -
Prci1g1782 175 SMART C2_3c 19 114 IPR000008 -
Prci1g1782 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 15 174 IPR044562 -
Prci1g1782 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1782 Prci-Chr1 38136041 38139881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1782 50 175 C2H2 Transcription Factor Family AT1G70790 56.250 5.15e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1782 - - fve:101307695 261.536