Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1763 ATGGCAAGGCAAGACAAGTCAGAGACAGGTAAAAGCAGCTTGGAGAACTTACTAGACTTGGACAAAACAAGAACTACAAAAAGCATTGTGAAGCAACTGAGACCCCTGAGGTCCATTCCTGAATATGGTCTAGAATTCCAAAGAATATCATACAGGGTTCAGAAGAAGCAGAAGAAGAATGGGGTTTGGATCAAGAAAGAAGCTTATATACTTCATGACATATCAGGGCAGGCAAATCGAGGCGAAATCATGGCAATCATTGGACCAAGTGGGGCCGGCAAATCGACATTCCTTGATGCCTTGGCTGGTCGGATCGCACAAGGGAGTCTTGAAGGATCAGTTAGAATGGATAGGAAACCAGTGACCGCAAGTTACATGAAGATGGTATCATCATATGTGATGCAAGATGGCCAGCTTTTTCCTATGTTGACAGTTTTTGAGACATTAATGTTTGCAGCAGAGGTTAGGCTTCCTCCTATACTCTCCACGGAGGATAAAAAGAACAGAGTTTATGAGCTCCTTAATCAGCTCGGCTTGCAGAGTGCAGCACATACATACATTGGTGATGAAGGGACAAGAGGAGTCTCAGGAGGGGAAAGACGAAGAGTATCTATCGGCATAGACATCATTCATAAGCCAGCACTTTTGTTTCTTGACGAACCAACATCAGGCCTCGATTCTACAAGTGCTTACAATGTAGTGGAAAAGATTAAACACATAGCTCAAGGTGGCAGTATTGTCCTCATGACCATACATCAGCCTTCGTTCAGAATTCAGAAGCTCCTGGACCAGATCACTATCCTTGCAAGGGGAAGATTGGTATACATGGGAAGGCCCGATGCACTTCCAGCTTATCTTTCTGGCTTTGGAAGAACAATACCAGATGGAGAAAATAGTATTGAGTACATGTTAGATGTTATTAAAGAATATGATGAATCAACGATTGGTCTAGACCCCCTTGTTCAGTACCAATGCTATGGCCAAAAGCCTGATCAAGCAGACATAACGCCAGTCCCTAAAACACCAAAGACTCCAAGAACACCTCACAGAAGTACCACCCCTGCATCTAAATATATTATTAACTTGCTGTCACAAGGATTCACTCCTGGAACATCAAAGCCTGATTCCACCCAAGTTGGTGATGTTGTTGATGATGATGATGATGATGATAGTTTTGATTACTCGCTTGAGAGGAAAAGTGCTCAGACGCCAAGGAGCAAGTCCAATGCTGGCGTCCCACGTTTGGCTTCTCAGTTCTACCAAGAGTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTATGGTAGGAACTCCTAAACGCCCAATTTCATGGACTCCGGCGAGAACTCCATCATGGACTCCGGTGAGAACTCCAGGATGGATGCCTGCCAAAACACCTAATCCATGGCCAAGAAATGTCATTTCCATCCAACATTCTGCATCATATCAGGACTCTTATCGAGCGAAGAGCTCCAATGTGGTTAGCCAATCTATGGACTCCTATGGACCTTCTTATGAAGAGCTTGAGATTGAAGATGCTCTTGAGGAGCCACATCTAGGATCCAAATATGCAAACCCATGGCTGCGTGAGGTTGCAGTGCTGTCATGGAGAACTGCACTCAATGTGATTCGAACCCCTGAACTCTTCCTGTCCCGTGAAGTTGTGTTAGCTGTAATGGCACTAATCCTCTCCTCCATCTTCAAAAACCTGGGTCATCTCACTTTCAAAGACATAAGTAGGCTTCTCAACTTCTATATCTTTTCAGTGTGCTTAGTTTTCTTCTCTTCCAATGATGCTGTCCCTACTTTCATCTTGGAAAGGTTCATCTTCATTAGAGAGACATCCCACAATGCTTATCGCGCATCTTCGTATGTCATTTCTTCCCTCATTGTTTATCTCCCATTTTTCGCTGTCCAAGGCTTCACATTTGCCGCCATAACCAAAATATTCCTTCACTTGAAAAGCAGTCTCTTTCATTTCTGGATGATCCTCTTTGCCTCGCTTATCACTACCAATGCCTATGTGATGCTTATTAGTGCACTTGTTCCAAGCTACATCACAGGGTACGCAGTAGTTATAGCAACAACTGCTCTCTTCTTCTTAACCTGTGGATTCTTCCTCAAGCGAACTCAGATACCTTCATATTGGAGGTGGCTTCACTATATTTCTGCAATCAAATACCCATTTGAGGCACTGCTGACAAATGAATTCAAGAACGACAAATGCTACACAGGGAACCCGACAGATTTGTCTCCTGGGCCATTAGGAGAAGTAAAGCGAAGCTCCCACCATAACAATTCGACTAATTGCTTAATAGGAGAGGATGTTTTATCCTCAATGGATATTCTTAAAGACGACATTTGGTATGACATATTTATCCTGCTTGCTTGGGGTGTTCTTTACAGGTTCTTGTTCTATTTGGTTCTGAGATTTTATTCCAAGAATGAAAGAAAATGA 2463 0.4332 MARQDKSETGKSSLENLLDLDKTRTTKSIVKQLRPLRSIPEYGLEFQRISYRVQKKQKKNGVWIKKEAYILHDISGQANRGEIMAIIGPSGAGKSTFLDALAGRIAQGSLEGSVRMDRKPVTASYMKMVSSYVMQDGQLFPMLTVFETLMFAAEVRLPPILSTEDKKNRVYELLNQLGLQSAAHTYIGDEGTRGVSGGERRRVSIGIDIIHKPALLFLDEPTSGLDSTSAYNVVEKIKHIAQGGSIVLMTIHQPSFRIQKLLDQITILARGRLVYMGRPDALPAYLSGFGRTIPDGENSIEYMLDVIKEYDESTIGLDPLVQYQCYGQKPDQADITPVPKTPKTPRTPHRSTTPASKYIINLLSQGFTPGTSKPDSTQVGDVVDDDDDDDSFDYSLERKSAQTPRSKSNAGVPRLASQFYQEFSAKDFSVWLYHGMVGTPKRPISWTPARTPSWTPVRTPGWMPAKTPNPWPRNVISIQHSASYQDSYRAKSSNVVSQSMDSYGPSYEELEIEDALEEPHLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREVVLAVMALILSSIFKNLGHLTFKDISRLLNFYIFSVCLVFFSSNDAVPTFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAAITKIFLHLKSSLFHFWMILFASLITTNAYVMLISALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPSYWRWLHYISAIKYPFEALLTNEFKNDKCYTGNPTDLSPGPLGEVKRSSHHNNSTNCLIGEDVLSSMDILKDDIWYDIFILLAWGVLYRFLFYLVLRFYSKNERK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1763 820 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Prci1g1763 820 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 808 - -
Prci1g1763 820 MobiDBLite consensus disorder prediction 397 411 - -
Prci1g1763 820 Gene3D - 42 287 IPR027417 -
Prci1g1763 820 MobiDBLite consensus disorder prediction 367 411 - -
Prci1g1763 820 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Prci1g1763 820 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Prci1g1763 820 SMART AAA_5 80 280 IPR003593 GO:0016887
Prci1g1763 820 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Prci1g1763 820 MobiDBLite consensus disorder prediction 331 354 - -
Prci1g1763 820 Pfam ABC-2 type transporter 533 739 IPR013525 GO:0016020|GO:0140359
Prci1g1763 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1763 Prci-Chr1 37873596 37877236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1763 41 314 Calmodulin-binding Proteins AT2G36910 23.509 4.46e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1763 K05681 - gmx:100819497 1160.21