Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1760 ATGGAACGGGATTTTCTGGGTTTGAGTACAATGATTGGTTCCGCGACTAAGAAAGAGGATGCTGCTGATATAGCTATAGACGCAGTAACAGGTTCAGGAATGCAGTGGTCATTTTCTAACAAGTTTCTGCTGTTCCTCAATTGTTGTCCTTCAAGACTTGTCAGGAAGACAGGGACAAGAAAGACCACGTCATCAGCGGATACTTTTGACTCTAACCTGAAACCATTCTTGGGTGGGATCCAGAAAAGTTTAAGCATGGGAAAACAAGTAGGAAATGAGCGTGGAATGACAGTTTATCCAATGCAACAAGTTGATAATATTTCAGGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTCCTGTTCTCCAATCTACTGTTAGTACCACTGTCCCTTTGATTGCCCCTGTACCTGTTCTTCCAGCTAATGGTTCCGTTGTTGGCACCACTGACTTAAGGAACTCATCCAAAACCTCTGGCAAACCTACTCAGTTGACAATTTTCTATGCTGGTTCAGTGTGTGTTTATGAAAACATATCTCCTGAGAAGGCTATAATGTTATTGGCTGGAAATGGGAGTACTCCAAATCATACAAAGCCAGTGTCAACAGCTCCAGTGCAAACACCAAACTCCAAGCCAGCACAAGATGATAGGTTTATCGTAAGCCAATCCTACCATTCGGCTTTACCAAGTCCAATTCCCATGACCTTCCATGCTAGTCCTCAGCCTGGGGGAGGATCTCCTAGCACCAATGAACCTGCAATAGTGAGACCAGTAGCATCATCTTCTGCTGCCCCAAGTAGCCATTTGGAGTCTCCTAGTGTAGCAGGCTCTGCAAAATCTGCGTCGACAAAAATGGGTTCACCTGTGGACTTGCCTCAGGCACGCAAAGCATCCTTGGCTCGATTCTTAGAGAAGCGCAAGGAAAGGGTGACAAGCACATCACCATACTCTATGAACAAGAAATCACCAGAATGTGGCACTCCAGGAACAGATAGTATTGGTTTCTCCATCACTTCTGGTTCCTGCTCCTTACCTGCCATGAACTAG 1071 0.4519 MERDFLGLSTMIGSATKKEDAADIAIDAVTGSGMQWSFSNKFLLFLNCCPSRLVRKTGTRKTTSSADTFDSNLKPFLGGIQKSLSMGKQVGNERGMTVYPMQQVDNISGYPQEARTFSVSNQSNQRSPVLQSTVSTTVPLIAPVPVLPANGSVVGTTDLRNSSKTSGKPTQLTIFYAGSVCVYENISPEKAIMLLAGNGSTPNHTKPVSTAPVQTPNSKPAQDDRFIVSQSYHSALPSPIPMTFHASPQPGGGSPSTNEPAIVRPVASSSAAPSSHLESPSVAGSAKSASTKMGSPVDLPQARKASLARFLEKRKERVTSTSPYSMNKKSPECGTPGTDSIGFSITSGSCSLPAMN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1760 356 MobiDBLite consensus disorder prediction 238 302 - -
Prci1g1760 356 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 117 335 IPR040390 -
Prci1g1760 356 Pfam tify domain 168 197 IPR010399 -
Prci1g1760 356 Pfam Jas motif 300 325 IPR018467 -
Prci1g1760 356 SMART tify_2 165 198 IPR010399 -
Prci1g1760 356 ProSiteProfiles Tify domain profile. 165 200 IPR010399 -
Prci1g1760 356 MobiDBLite consensus disorder prediction 320 346 - -
Prci1g1760 356 MobiDBLite consensus disorder prediction 249 295 - -
Prci1g1760 356 MobiDBLite consensus disorder prediction 314 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1760 Prci-Chr1 37862422 37866377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1760 34 330 Tify Gene Family AT3G17860 38.994 2.15e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci1g1760 tify 4.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1760 K13464 - gmx:100807288 319.316