Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1756 ATGCTGCCTCACAAGCTCACTCTGTTGCTTCCCATCTTCCTCATTTTGCTTCCTCTGGCCAGACCAGATCTGGCTTCTGAGCGGACTGCTCTCCTCGCTCTCCGTTCCTCGGTGGGAGGCCGAACCCTTCTCTGGAACATCACCTTGCAGAATCACTGTAAGTGGGCTGGCGTCCAATGCGACCATGACCAGGTCGTCGAGCTTCATCTTCCCGGTGTTGGGCTTTCCGGCCGGTTACCTAACGGCATTTTCGGGAACCTCACTCATCTCCAGACTCTCAGTCTGCGTTTCAACGCCTTGACTGGAAGTCTCCCTTCAGATCTCGCTTCTTGCGTCCACCTTCGGAATCTTTACTTGCAGCGAAACTTGCTCTCTGGAGAAATCCCTGAATTCTTGTTCTCTTTACCCGACATGGTTCGCCTTAATTTGGGGCACAACAATTTTTCCGGTGCGATTCCGCTAGAGTTCAACAAGTTGGCGAGGCTGAGGACTCTGTATCTCGAGAATAATCAGCTTTCAGGTTCCATTCCTGGGTTGAACCTGGAAAATCTCGAGCAGTTCAACGTGTCGAACAATTTGTTAAACGGGTCGGTACCGGTAAAGTTACAGACATTTTCCGAAGATTCATTTCTAGGCAATTCACTGTGTGGGAAGCCCCTCAAGCTGTGCCCAGGAGAAGGAGCTGCAATATCTCCGTCGGGTGAGATTGATAACAACAACCGGGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATAGCTGGGATAGTCGTTGGATCTGTGGTGTTTCTCCTGTTGGTTCTGTTTGCTTTGATTCTGCTTTGCCGGAAGAAGAGTAGTAAGAAGTCGAGCTCCGTCGACATTGCTACTATGAAGCATCCAGAAACTGAAATTCCAGGCGATAAACCCGTTTCAGATGTGGAGAATAGTGGTCAAAGTAATGGGTATTCGGTAGCTGCTGTGGCCGCAGCAGCCATGACCGGAAACGGCAGAACAGAATTGAACAGCAATGACGGATCGAAGAAGTTGGCATTCTTCGGTAATTCACCGAAAGTGTTTGATCTGGAAGATTTGCTTAGAGCTTCGGCAGAGGTTTTGGGTAAAGGAACGTTCGGAACAGCTTATAAGGCGGTCCTGGAGGCTGGTCCGGTGGTGGCTGTGAAAAGGTTGAAGGATGTGACAATTTCTGAAAAGGAATTCAAGGAGAAGATTGAATTGGTTGGAGCAATGGATCATGAGAATTTGGTTCCTCTCAGGGCTTATTATTTCAGTAGGGATGAAAAACTTCTTGTCTATGATTACATGCCAACGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCGCTAGGAGCTGCTCAAGGCATCGAGTACCTACATTCACAGGGACCTAATGTTTCTCATGGAAACATAAAGTCATCCAACATCCTCCTCACCAAATCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGTCCTTCCTCCACTCCCAATCGGGTTGCTGGCTACCGTGCGCCAGAAGTTACTGATCCTCGCAAAGTTTCTCAGAAGGCAGATGTCTACAGCTTTGGAGTGCTGCTCTTGGAACTTCTGACTGGAAAGGCTCCCACACATTCTCTCTTAAACGAGGAAGGAGTAGATCTCCCAAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTCAGGTATCAGAATGTTGAGGAGGAGATGGTTCAATTATTGCAGCTTGCAGTTGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGCCTGAGGTGAGGCAACGCATAGAAGAGTTACGTCGTTCAAGCCTGAAGGAGGATCAAGACCAAATTCAGCAGCCTGATCTGATCAATATAATGTAG 1950 0.4805 MLPHKLTLLLPIFLILLPLARPDLASERTALLALRSSVGGRTLLWNITLQNHCKWAGVQCDHDQVVELHLPGVGLSGRLPNGIFGNLTHLQTLSLRFNALTGSLPSDLASCVHLRNLYLQRNLLSGEIPEFLFSLPDMVRLNLGHNNFSGAIPLEFNKLARLRTLYLENNQLSGSIPGLNLENLEQFNVSNNLLNGSVPVKLQTFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIDNNNRGKKKKLSGGAIAGIVVGSVVFLLLVLFALILLCRKKSSKKSSSVDIATMKHPETEIPGDKPVSDVENSGQSNGYSVAAVAAAAMTGNGRTELNSNDGSKKLAFFGNSPKVFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAAQGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMPEVRQRIEELRRSSLKEDQDQIQQPDLINIM 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1756 649 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Prci1g1756 649 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Prci1g1756 649 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Prci1g1756 649 Gene3D Transferase(Phosphotransferase) domain 1 434 647 - -
Prci1g1756 649 Gene3D Ribonuclease Inhibitor 138 223 IPR032675 -
Prci1g1756 649 PANTHER OS05G0588300 PROTEIN 10 632 - -
Prci1g1756 649 Pfam Leucine rich repeat 78 124 IPR001611 GO:0005515
Prci1g1756 649 CDD STKc_IRAK 365 628 - -
Prci1g1756 649 FunFam pollen receptor-like kinase 1 328 433 - -
Prci1g1756 649 ProSiteProfiles Protein kinase domain profile. 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1756 649 FunFam Probable inactive receptor kinase At1g48480 434 637 - -
Prci1g1756 649 Pfam Protein kinase domain 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1756 649 SUPERFAMILY L domain-like 45 202 - -
Prci1g1756 649 Gene3D Phosphorylase Kinase; domain 1 325 433 - -
Prci1g1756 649 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Prci1g1756 649 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Prci1g1756 649 SUPERFAMILY Protein kinase-like (PK-like) 363 629 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1756 Prci-Chr1 37806961 37809732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1756 23 644 Receptor kinase-like Gene Family AT1G48480 65.087 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci1g1756 Pkinase 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1756 - - qsa:O6P43_008468 950.273