Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1753 ATGCATTCAATCCACAGTCCCTCTTGCTTTGCCAACCTCAATCACCCTTTATCCAAGTTCAATCGTATTTCCTACTGTTTGGTTGGATCTAATGTGTTACAGGCCTCCTGCGCAACCTCAGCTGTTCGTAGCTTCGGATTGAGTGCTTTTGATTCTGAATTCTTGCCCAAATTTGGTTCTTTTCAGAACCCACGTTTTGTTTTCGCGCGCAGTAAACCCTGGCGCTGTGTGATAGCCAGAGCTACCGGAAATGACTACTATTCGACTTTGAAAGTTAGTAAGAATGCTTCTTTGCAAGAGATTAAGAGCGCTTACAGAAAATTAGCCCGTAAGTACCATCCAGATATGAACAAGAGCCCGGGGGCAGAAGAGAAATTCAAGGAGATAAGTGCTGCATATGAGGTTCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAACTGGAGTGTCAGCTAGTGCTTCAGGGGTTGATCCTTTTGACGTATTTGATGCATTCTTTGGTGGTTCGGATGGTCTATTTGGAGGCGGTGATGAACTAGGAGGAATGAACTTCAATTCAAGGAACAACAGAAAACGGGGTCTTGATATTCGGTATGACCTTCACTTGAGCTTTGAGGAATCTATTTTTGGAGGAAGGAGAGAAATTGAAGTTCCTTGTTTTCAGACATGTAATGATTGTGATGGTACAGGAGCTAAATCAAGGGATTGCATTAAACCATGCATGAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAAAGAACACCCTTTGGAGTAATGTCTCAGGTTTCAACCTGCTCTGAGTGCCGTGGTCTTGGCAAGATAATCACTGATAACTGTCGAAGGTGCAGTGGTAGTGGACGGGTGCAGTCTAAACAAACAATGGAAATAGTCATTCCTCCTGGTGTCAATAACGGAGCCACAATGCAAATTCAAGGAGAGGGGAATTTTTATAAGAATAGGGGTACAGCTGGTGACCTTTATATAGTCATCCATGTTGGTGAAAAAGATGGAGTTTGGAGAGAAGGTCTTCATTTGTACTCTAAGATTAATATTGATTTCACAGAGGCAATTCTTGGGTCTGTTAAAAAGGTAGAAACAGTTGAGGGTTTAAGGGATCTCCAAATTCCTTCTGGGATTCAACCAGGAGATTTTGTGAAGTTGTCACGTTTGGGAGTTCCTGACATGAATAAGCCATCTGTTCGAGTGGTGCTGAACGTGTTCTTGTTGAGGAATTGGCTTCACTGA 1278 0.428 MHSIHSPSCFANLNHPLSKFNRISYCLVGSNVLQASCATSAVRSFGLSAFDSEFLPKFGSFQNPRFVFARSKPWRCVIARATGNDYYSTLKVSKNASLQEIKSAYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLQGETGVSASASGVDPFDVFDAFFGGSDGLFGGGDELGGMNFNSRNNRKRGLDIRYDLHLSFEESIFGGRREIEVPCFQTCNDCDGTGAKSRDCIKPCMNCGGRGGEMKSQRTPFGVMSQVSTCSECRGLGKIITDNCRRCSGSGRVQSKQTMEIVIPPGVNNGATMQIQGEGNFYKNRGTAGDLYIVIHVGEKDGVWREGLHLYSKINIDFTEAILGSVKKVETVEGLRDLQIPSGIQPGDFVKLSRLGVPDMNKPSVRVVLNVFLLRNWLH 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1753 425 CDD DnaJ 85 138 IPR001623 -
Prci1g1753 425 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 43 412 - -
Prci1g1753 425 SUPERFAMILY HSP40/DnaJ peptide-binding domain 200 343 IPR008971 GO:0006457|GO:0051082
Prci1g1753 425 SMART dnaj_3 84 141 IPR001623 -
Prci1g1753 425 Pfam DnaJ domain 85 146 IPR001623 -
Prci1g1753 425 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Prci1g1753 425 Gene3D - 233 297 - -
Prci1g1753 425 FunFam Chaperone protein dnaJ A6 chloroplastic 82 188 - -
Prci1g1753 425 SUPERFAMILY HSP40/DnaJ peptide-binding domain 351 407 IPR008971 GO:0006457|GO:0051082
Prci1g1753 425 ProSiteProfiles dnaJ domain profile. 85 149 IPR001623 -
Prci1g1753 425 ProSiteProfiles Zinc finger CR-type profile. 220 302 IPR001305 GO:0031072|GO:0051082
Prci1g1753 425 Gene3D - 350 418 - -
Prci1g1753 425 Gene3D - 203 339 - -
Prci1g1753 425 CDD DnaJ_zf 233 297 IPR001305 GO:0031072|GO:0051082
Prci1g1753 425 FunFam Molecular chaperone DnaJ 225 302 - -
Prci1g1753 425 CDD DnaJ_C 205 407 - -
Prci1g1753 425 SUPERFAMILY Chaperone J-domain 82 190 IPR036869 -
Prci1g1753 425 PRINTS DnaJ domain signature 121 141 IPR001623 -
Prci1g1753 425 PRINTS DnaJ domain signature 141 160 IPR001623 -
Prci1g1753 425 PRINTS DnaJ domain signature 87 105 IPR001623 -
Prci1g1753 425 PRINTS DnaJ domain signature 105 120 IPR001623 -
Prci1g1753 425 Pfam DnaJ central domain 233 297 IPR001305 GO:0031072|GO:0051082
Prci1g1753 425 Hamap Chaperone protein DnaJ [dnaJ]. 82 423 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci1g1753 425 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 220 300 IPR036410 -
Prci1g1753 425 Pfam DnaJ C terminal domain 206 411 IPR002939 -
Prci1g1753 425 Gene3D DnaJ domain 82 184 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1753 Prci-Chr1 37771012 37777495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1753 86 146 C2H2 Transcription Factor Family AT1G74250 44.776 4.85e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1753 K03686 - gmx:100782135 531.946