Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1743 ATGGATAATACGGAATCTCAGCGGCTTCACAGTGCTGGAGAGAACAGCCATGAACAAGATCTTGAAAAGGACGACATCCTCAAGACAAGAATCTCCAGCCATCCTCTCTATGAGCTCCTCCTTCAAGCTCACTTGCAGTGTTTGAAGGTAAGTGAGATTTCCAACTTGGAGAGAGAGCAGGAGATAGATCAGAAGCTAATAATGAACAGGCAAAGCTTAGACATGTACAGTGAGCCAGAGCTTGATCTCTTCATGGAAGCATATTGCATGGCATTGGGGAAGCTGAAAGAAGCAATGGAGGAACCACAGCAAAAGGTGATGGCTTTCATAAACAAGATGCATTCACAACTGAAAGAGCTCACTGTTATTAATGCCTTGCCAGGTCATCAACCACCTGCATCTCCTTCGTCTTCTGCTCATTGCAATATTCTTGAAAACGATTCTTCAATTTAG 453 0.4371 MDNTESQRLHSAGENSHEQDLEKDDILKTRISSHPLYELLLQAHLQCLKVSEISNLEREQEIDQKLIMNRQSLDMYSEPELDLFMEAYCMALGKLKEAMEEPQQKVMAFINKMHSQLKELTVINALPGHQPPASPSSSAHCNILENDSSI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1743 150 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g1743 150 Pfam KNOX2 domain 77 121 IPR005541 GO:0003677|GO:0005634
Prci1g1743 150 SMART KNOX2_2 71 122 IPR005541 GO:0003677|GO:0005634
Prci1g1743 150 MobiDBLite consensus disorder prediction 130 150 - -
Prci1g1743 150 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 8 122 - -
Prci1g1743 150 MobiDBLite consensus disorder prediction 128 150 - -
Prci1g1743 150 Pfam KNOX1 domain 27 50 IPR005540 GO:0003677|GO:0005634
Prci1g1743 150 SMART KNOX1_2 25 68 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1743 Prci-Chr1 37599989 37601596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1743 25 120 Homeobox Transcription Factor Family AT4G08150 36.275 1.32e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1743 - - aprc:113868091 153.295