Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1740 ATGGCTCTCGTCCGCGATCGCCGCCATCTCAACCTCCGCCTCCCTCTACCGGAACCCTCCGAGCGCCGTCCTCGCTTCCCCCTCCCAGTCCCTCCCTCCTCCACGGCCTCCAACAACTCGGTCGCCGCTGATATCGCCCCTAACGATCTCGAAAAGCTTCAGGTACTTGGCCACGGCAACGGTGGCACAGTTTATAAGGTCCGTCACAAGCGCACCTCCGCCGTCTACGCTCTCAAGGTCGTCCATAGCGACTCCGATCCCATGACCCGCCGTCAAGTCCGGAGGGAGATGGATATCCTCCGCCGGACGGACTCGCCTTACGTCGTGCGCTGTCACGGGTTCTTCGAGAAACCTTCCGGAGATGTGGCGATTGTCATGGAGTATATGGATTTGGGAACGCTGGACACGTTGTTAAAGAAGAACGGGACGTTTTCTGAAGCCCAACTCGCGGCGGTGGCGCGCCAGGTTTTAAATGGGCTGAGCTATCTCCACGCGCACAAGATTGTCCACCGCGATATCAAGCCCTCGAATCTATTGGTGAATCAGAAAATGGAAGTGAAAATCGGTGATTTTGGAGTAAGCAAGGTCATGTGCCGCACGCTAGACGCGTGCAACTCATACGTTGGGACGTGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATAGGTATGGGGGGAATTATAACGGATACTCGGGCGATATATGGAGCTTGGGCCTTACCTTGTTCGAACTGTACGTGGGTCACTTCCCGTTTCTACCGGCGGGTCAGAGGCCCGACTGGGCGACCCTGATGTGTGCGATTTGCTTCGGAGACCCGCCTAGCTTGCCCGGGAAGGCTTCGAAAGAGTTTCGGAGCTTCATAGATTGTTGCCTGAAGAAGGAGTCTAGTGAGAGGTGGAGTGCCTGTCAGCTTTTGAGTCATCCATTTCTTTCGGGGAAGTGTTAG 948 0.5654 MALVRDRRHLNLRLPLPEPSERRPRFPLPVPPSSTASNNSVAADIAPNDLEKLQVLGHGNGGTVYKVRHKRTSAVYALKVVHSDSDPMTRRQVRREMDILRRTDSPYVVRCHGFFEKPSGDVAIVMEYMDLGTLDTLLKKNGTFSEAQLAAVARQVLNGLSYLHAHKIVHRDIKPSNLLVNQKMEVKIGDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDRYGGNYNGYSGDIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPSLPGKASKEFRSFIDCCLKKESSERWSACQLLSHPFLSGKC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1740 315 SUPERFAMILY Protein kinase-like (PK-like) 46 312 IPR011009 -
Prci1g1740 315 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1740 315 FunFam Mitogen-activated protein kinase kinase 30 126 - -
Prci1g1740 315 FunFam Mitogen-activated protein kinase 2 131 315 - -
Prci1g1740 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Prci1g1740 315 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 37 313 - -
Prci1g1740 315 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1740 315 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Prci1g1740 315 Gene3D Phosphorylase Kinase; domain 1 32 125 - -
Prci1g1740 315 Coils Coil 315 315 - -
Prci1g1740 315 CDD PKc_MAPKK_plant_like 48 311 - -
Prci1g1740 315 MobiDBLite consensus disorder prediction 14 40 - -
Prci1g1740 315 Pfam Protein kinase domain 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1740 315 Gene3D Transferase(Phosphotransferase) domain 1 126 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1740 Prci-Chr1 37531861 37533001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1740 1 311 MAP Kinase Kinase Gene Family AT1G73500 64.537 3.71e-141 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci1g1740 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1740 K20604 - qsa:O6P43_008459 527.709