Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1739 ATGGAGTTCGGCTTCTTCAGAGGCTTGCCCGAGGAGATCTTCCTCCTGGACATTGCCGGCCAATTTGCTTTCCTCGTCGATATCGTCATCCGATTTTTCCTCACTTACCGTGATACCTCCTCCTCCAATTCCTGGGTCTTCGATCACCGTAAAATCGCGAAGAGGTACTTGAAGTCACGGTTCACGCCCGATTTTCTGAGTTGTTTGCCCTGGGATTATATTTACAAGGCTGCTGGCAGGAAAGAGCCAGTGAGGTATCTTCTATGGATCAGGCTATGGCGAGCATTTAGAGTGACTGAATTTTTTGAGAAGCTGGAGAAAGATATGAGGATCAATTACCGCTGTACTAGAATTGTGAAACTTCTTGTTGTTGAACTCTATTGCACACATACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTTTGCCCCCTTCTAAGGAAGGTTATACATGGATAGGCAGCTTGAAGATGGGTGACTACAGCTATTCGGACTTCAGACATATTAGTCTTTGGAGGCGTTATGTGACATCACTCTACTTTGCAATAGTTACCATGGTAACTGTTGGCTTTGGAGAAATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATATTTGTTTCCTCTGACATGATTCTGGCTGCTTATCTTTTTGGTAACATGACAGCATTGGTCGTGAAAGGATCAAGAACAGAGAAGTTTAGGGACAAAATGTCTGAACTTATCAAGTACATGAATAAAAGAAAATTGGATAAGCAGATAACTAAGGAGATTGGAGGCCATTTGCGCTTACAATATGACCGCAGAGACACTGAGGCCGCTATTGATGAAGATGTTCCAGTTTCTATCCGCACAAAGATTTCAATGGATTTGTATGAGCAATTCATTCAGAAAGTTCATCTTTTCAAGGGATGTTCTTCTGGGTTCATTAAACATGTTGCAATCAATGTCCATGAGGAGTTTTTCCTCCCAGGAGAAGTTATTATGGAGAAAGGAGATTTAGTAGATCAACTTTACCTTGTATGCCATGGTGAGCTGGAAGAGCTAAGAATGGAAGATGATGAACGAGAAGAGCTGGTTAAGCAAGATCAAACCTACAGTTCCTTTGGCGAGGTTTCCTTTCTTTGCAATTTGCCTCAAACTTACATGGTTCGCGCTCGTGAATTTTGCAAAGTTCTGCGCCTAGATAAGCTATCCTTTACAGAAATATTCAAAACATACTTCCTAGATGGCCGGGTTATCTTGCAAAATCTTCTTGAGGGAAAAGACTGTGCTCTTCAGCATGAGATTTTGGAATCAGGCTTCACCTTGACAATTGGAAATCGTGAAACAGAACTGGCTGTGAGGATTAATTGTGCTGCCTATGAGGGGGATTTCTATCTTTTGAAACATTGGATTGAATCAGGACTAGATCCCAACAAAACTGATTATGATGGAAGATCACCTTTGCATATTTCTGCATCTAAAGGATATGTAGATATTGCTTGCTTTCTTGTTGACAAAGGAGTGAATATTGATTTATCAGATAAGTTTGGGAATACTCCATTGTTTGAAGCCATAAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTAAATAAGGGGGCTATTCTTACCATTGAAGATGCTGGAAGTTTTCTATGCATGACTGCTGCAACGAAGGAACTGGACCTTTTAAGAAAGCTTTTAGCCCATGGTATAGATCCAAATTCTAGAAATTACGATCAACGAACAGCTCTTCATATAGCTGCCTCGGAGGGTTTGTTCACCGTTGCTGAAACGCTCATAGAAGCAGGAGCAAGTGTTTTATCAACGGACAGGTGGGGATATACGCCACTTGATGATGCTCGCATAGGTGGAAATAGGAACATGATCAAATTGCTTGAAGTAGCAAAAATTTCTCAGCTTTCTGAGATATCAGATAGTATTCAGGAAACACAAGGTAAGCATTCTGACATTGCTACTTGGACTAAGATAGCAGAAACACATCTTTCACCATCAAGAGATGGAAGTCCGAAAAAGAAATGCACTGTATTTCCTTTCCACCCATGGGATCTCAAAGAGGATGGAAGAGAAAGAGCTGTCCTTTGGGTTCCTGGCAGCATTGAAGAGCTAATAAAGATGGCAAGAGAACAATTAAAATTTCCCAAAGGTTCCCGCATTTTATCTCAGCATGGTGGTAGAATTCTTGATGTTGACATGATTAACAATGATGAGCAGCTATTTCTAACAAGTGAACCTCACATTGAGGAGCAAGGAATTGAAGACTGTTGTGGTCATCCATCCAAATGA 2298 0.4108 MEFGFFRGLPEEIFLLDIAGQFAFLVDIVIRFFLTYRDTSSSNSWVFDHRKIAKRYLKSRFTPDFLSCLPWDYIYKAAGRKEPVRYLLWIRLWRAFRVTEFFEKLEKDMRINYRCTRIVKLLVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLKMGDYSYSDFRHISLWRRYVTSLYFAIVTMVTVGFGEIHAVNVREMIFVMIFVSSDMILAAYLFGNMTALVVKGSRTEKFRDKMSELIKYMNKRKLDKQITKEIGGHLRLQYDRRDTEAAIDEDVPVSIRTKISMDLYEQFIQKVHLFKGCSSGFIKHVAINVHEEFFLPGEVIMEKGDLVDQLYLVCHGELEELRMEDDEREELVKQDQTYSSFGEVSFLCNLPQTYMVRAREFCKVLRLDKLSFTEIFKTYFLDGRVILQNLLEGKDCALQHEILESGFTLTIGNRETELAVRINCAAYEGDFYLLKHWIESGLDPNKTDYDGRSPLHISASKGYVDIACFLVDKGVNIDLSDKFGNTPLFEAIKNGHEEVASLLVNKGAILTIEDAGSFLCMTAATKELDLLRKLLAHGIDPNSRNYDQRTALHIAASEGLFTVAETLIEAGASVLSTDRWGYTPLDDARIGGNRNMIKLLEVAKISQLSEISDSIQETQGKHSDIATWTKIAETHLSPSRDGSPKKKCTVFPFHPWDLKEDGRERAVLWVPGSIEELIKMAREQLKFPKGSRILSQHGGRILDVDMINNDEQLFLTSEPHIEEQGIEDCCGHPSK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1739 765 SMART ANK_2a 544 573 IPR002110 GO:0005515
Prci1g1739 765 SMART ANK_2a 513 542 IPR002110 GO:0005515
Prci1g1739 765 SMART ANK_2a 577 606 IPR002110 GO:0005515
Prci1g1739 765 SMART ANK_2a 610 639 IPR002110 GO:0005515
Prci1g1739 765 SMART ANK_2a 447 476 IPR002110 GO:0005515
Prci1g1739 765 SMART ANK_2a 480 509 IPR002110 GO:0005515
Prci1g1739 765 SUPERFAMILY Voltage-gated potassium channels 11 228 - -
Prci1g1739 765 PANTHER POTASSIUM CHANNEL AKT1 1 747 IPR045319 GO:0005249|GO:0006813
Prci1g1739 765 CDD CAP_ED 303 417 IPR000595 -
Prci1g1739 765 ProSiteProfiles Ankyrin repeat profile. 480 512 IPR002110 GO:0005515
Prci1g1739 765 Gene3D - 441 545 IPR036770 -
Prci1g1739 765 ProSiteProfiles Ankyrin repeat region circular profile. 480 512 - -
Prci1g1739 765 ProSiteProfiles Ankyrin repeat region circular profile. 577 609 - -
Prci1g1739 765 Gene3D Jelly Rolls 273 434 IPR014710 -
Prci1g1739 765 ProSiteProfiles cAMP/cGMP binding motif profile. 303 423 IPR000595 -
Prci1g1739 765 Pfam KHA, dimerisation domain of potassium ion channel 676 745 IPR021789 -
Prci1g1739 765 Pfam Ion transport protein 15 226 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 127 137 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 175 192 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 219 228 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 28 37 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 PRINTS EAG/ELK/ERG potassium channel family signature 386 394 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci1g1739 765 Pfam Cyclic nucleotide-binding domain 323 409 IPR000595 -
Prci1g1739 765 ProSiteProfiles Ankyrin repeat region circular profile. 513 544 - -
Prci1g1739 765 SMART cnmp_10 303 421 IPR000595 -
Prci1g1739 765 SUPERFAMILY cAMP-binding domain-like 231 421 IPR018490 -
Prci1g1739 765 Gene3D - 3 228 - -
Prci1g1739 765 Pfam Ankyrin repeats (many copies) 564 616 IPR002110 GO:0005515
Prci1g1739 765 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Prci1g1739 765 Pfam Ankyrin repeats (3 copies) 454 543 IPR002110 GO:0005515
Prci1g1739 765 SUPERFAMILY Ankyrin repeat 452 630 IPR036770 -
Prci1g1739 765 Gene3D - 546 640 IPR036770 -
Prci1g1739 765 ProSiteProfiles KHA domain profile. 677 763 IPR021789 -
Prci1g1739 765 FunFam Potassium channel KAT2 291 427 - -
Prci1g1739 765 ProSiteProfiles Ankyrin repeat profile. 513 545 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1739 Prci-Chr1 37508219 37516661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1739 1 609 Ion Channels AT5G37500 58.162 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1739 K21867 - cave:132185413 1009.98