Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1728 ATGCCCCAGAATAATAAGATTTGGAAAGACCCTTCATCATCGAATCCGATGCCTGATCTTTCTCTTCACATAAGCCTTCCCAACAGTGCTCCGTCTTCAATTTGCACTGCAAATAACAACGAAGAAGCAGATTCGTCGTTTGATATTTGGAGAAGCAGCACAGAAGAAGTAGTCGATGGCGTCAAATCCCACAGTGAGAGTTCAATCAGAGGCAGCCCTCAGGCTCACACTAGTCACCGCCATCATCCCTCTCTCTTCAATCATCTTCCTGCAAGTATTGGTTCTGAGGCCGAGAGCCCCTGGAGGACGACGAGATTAAGCGACGTCGTTCGAGGCAGAGAAGAAGATGGTGGGTTCTGGGTTTCACAGCAGGGACTCAATTCAAGACCCATCCGAGGAATCCCACTTCAGGATTCCAATAATATTTCTATGTACCCACTTCATCAGCAATTTCCGTATCAGAATAATTACTCATCAGCAGCTTCTTCTTATCATCTTAGTTATAATAGCAACATGTTGCCGGAGAACCCCATCTCGAGGTTCAATGGGATAAGCATGGAGAGTCTGATAAGACCCTATCAACCCCATCATCATCATCAGTATCACCTCTTGAACCATCATCATCAGTTTGGTTCATCAAACTCTGATTTCTCAAACGGATTTGGGAGGTCCAAGATGTTGCCTAACAGGCTTCACAGTAATAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACCAGCTCTCTCCATGCTCGTTTTGTTCACGCCGTTGAGCTCCTTGGTGGCCATGAAAGAGCTACCCCTAAGTCAGTTTTGGAGCTCATGGATGTGAAAGATCTAACACTTGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAATACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACGCCTCCACCACTAAATGAAAATGAGAGCTATTTTTCACCCAACAAGAGAGGCCCTACAAATGCATCATCTTCAGATCAGGATATGGCCTACAATAGCAGCAATCTGTGGGGTAATTCTTCTAGCAGACGAGCATGGATGGAAGCTAGTTCCACAGATTTAGATGGAATCAGACCACCAGATATTTTATCATCTTCTCAGCAAAGAACTGAGAAATCCGAGGGAAATAATAATTTGTTACAGTCAAGAAGCTTAAAGGAGTATGAGAATTTAAGCTTGGAGTTCACTCTAGGGAGATCAACGTGGGAAAGCAACGAACATGCCTAG 1269 0.4468 MPQNNKIWKDPSSSNPMPDLSLHISLPNSAPSSICTANNNEEADSSFDIWRSSTEEVVDGVKSHSESSIRGSPQAHTSHRHHPSLFNHLPASIGSEAESPWRTTRLSDVVRGREEDGGFWVSQQGLNSRPIRGIPLQDSNNISMYPLHQQFPYQNNYSSAASSYHLSYNSNMLPENPISRFNGISMESLIRPYQPHHHHQYHLLNHHHQFGSSNSDFSNGFGRSKMLPNRLHSNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPPLNENESYFSPNKRGPTNASSSDQDMAYNSSNLWGNSSSRRAWMEASSTDLDGIRPPDILSSSQQRTEKSEGNNNLLQSRSLKEYENLSLEFTLGRSTWESNEHA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1728 422 SUPERFAMILY Homeodomain-like 238 295 IPR009057 -
Prci1g1728 422 Pfam Myb-like DNA-binding domain 242 293 IPR001005 -
Prci1g1728 422 Gene3D - 240 297 - -
Prci1g1728 422 MobiDBLite consensus disorder prediction 58 85 - -
Prci1g1728 422 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 17 421 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci1g1728 422 MobiDBLite consensus disorder prediction 362 398 - -
Prci1g1728 422 MobiDBLite consensus disorder prediction 317 350 - -
Prci1g1728 422 MobiDBLite consensus disorder prediction 1 39 - -
Prci1g1728 422 MobiDBLite consensus disorder prediction 298 350 - -
Prci1g1728 422 MobiDBLite consensus disorder prediction 375 398 - -
Prci1g1728 422 FunFam Myb family transcription factor 239 297 - -
Prci1g1728 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 241 294 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1728 Prci-Chr1 37309778 37319400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1728 129 416 G2-like Transcription Factor Family AT5G16560 42.857 1.31e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci1g1728 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1728 - - lang:109340070 369.007