Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1699 ATGTGTAGTAGAGGCCATTGGAGGCCGGCCGAGGATGAGAAGCTTCGAGAGTTGGTGGAGCGTTATGGACCTCATAATTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAGAGCTGCAGGTTGAGGTGGTTCAATCAGCTGGACCCAAGAATTAATAGGAGTCCATTCACAGAGGAAGAAGAAGAGAGGCTTCTGGCTTCTCACAGGATCCACGGAAACAGATGGGCTGTGATTGCGAGGCTTTTTCCAGGACGAACTGATAATGCTGTCAAGAATCACTGGCACGTCATGATGGCTAGGATTCGCCGAGAAAGGTCCAAGCTTTATGCAAAACGGCCTCATCATCATCAGCTCACCACATCACAGTGTTCTCCACTGCGATCAGATCCTCCTAATACTGATGATCATGATCAGGATCATCATCATCATCATCATCGCTCAAGCTATGATACAATTCTTAGGACGACGACCAGTCCTGCTGCTAGTCTTGTTCCTGCTTTTGTTGAGAAATACTATGACAAGCTTGCTTTGCCATCAGCTTATTGTCTCCCTTATAACCCTTTCCTTCAATTTCCCAGAAAGTTTGATCATCACTTTCAAAATCCAGCTTCCTCTTCATCAAAACTTCATGATAAAAGTCATCAATCAGTTGAGTTCTATGACTTTCTTCAAGTAAACACTGATTCTAACAACAGAAGCGAGGTAACAGACAACGCCAGAAGAGAAGACGAGGAAGTGAATCAAGATAGTGAACATAATGTTAGAGGACGACAGAGAAAAGACAGGACTACTGCTGGTGGTAGTGGTGTTCCGTTTATCGATTTTTTATCTGTTAATGGAAGCTCCCAACACAAGTTCGATCGTACTCATCATGCACAAGAATCGATGCACTTTCATACATATATTTTGTAA 921 0.4376 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVMMARIRRERSKLYAKRPHHHQLTTSQCSPLRSDPPNTDDHDQDHHHHHHRSSYDTILRTTTSPAASLVPAFVEKYYDKLALPSAYCLPYNPFLQFPRKFDHHFQNPASSSSKLHDKSHQSVEFYDFLQVNTDSNNRSEVTDNARREDEEVNQDSEHNVRGRQRKDRTTAGGSGVPFIDFLSVNGSSQHKFDRTHHAQESMHFHTYIL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1699 306 MobiDBLite consensus disorder prediction 118 132 - -
Prci1g1699 306 Gene3D - 4 55 - -
Prci1g1699 306 MobiDBLite consensus disorder prediction 114 155 - -
Prci1g1699 306 MobiDBLite consensus disorder prediction 233 271 - -
Prci1g1699 306 MobiDBLite consensus disorder prediction 237 265 - -
Prci1g1699 306 FunFam MYB transcription factor 4 55 - -
Prci1g1699 306 PANTHER MYB PROTEIN-RELATED 4 196 - -
Prci1g1699 306 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Prci1g1699 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Prci1g1699 306 SMART sant 55 103 IPR001005 -
Prci1g1699 306 SMART sant 3 52 IPR001005 -
Prci1g1699 306 Gene3D - 57 126 - -
Prci1g1699 306 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Prci1g1699 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Prci1g1699 306 CDD SANT 7 48 IPR001005 -
Prci1g1699 306 CDD SANT 58 101 IPR001005 -
Prci1g1699 306 MobiDBLite consensus disorder prediction 133 153 - -
Prci1g1699 306 Pfam Myb-like DNA-binding domain 7 67 - -
Prci1g1699 306 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1699 Prci-Chr1 36752150 36754345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1699 1 285 MYB Transcription Factor Family AT1G17950 49.502 1.07e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1g1699 Myb_DNA-bind_6 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1699 K09422 - qsa:O6P43_005257 321.242