Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1679 ATGGAGTACGGGAGTGGAGGCGGTGGTGGGTCCCCTGGGGACCACCACCACCATCACCACCACCTTCACGACGGTTCGGATTCGCAGAGGAACAAGAAGCGATACCATCGTCACACAGCTAACCAGATTCAGAGGCTTGAATCAATGTTCAAGGAGTGCCCCCACCCTGATGAAAAGCAGAGATTACAGTTAAGCAGAGAACTAGGGCTGGCCCCTAGGCAGATCAAGTTTTGGTTCCAGAACAGGAGGACCCAGATGAAGGCCCAGCATGAGAGAGCCGATAACTGTGCTCTAAGAGCAGAGAATGACAAGATTCGTTGCGAGAACATAGCTATCAGAGAGGCCCTCAAAAATGTCATTTGCCCTTCTTGTGGAGGACCTCCTCTTCACGAAGAATCTTATTTCGACGAGCAAAAATTGCGTCTGGAAAATGCTCAATTGAAAGAAGAGCTCGATAGAGTATCCAGCATTGCGGCTAAATACATTGGAAGGCCGATTTCTCAACTCCCTCCGGTTCAGCCGATTCATATTTCTTCTTTGGACTTGTCAATGGGAAGCTTTGGGGGTCAAACCGTGATGGGTGGTGGTCCTTCTCTTGACCTTGATCTTCTTCCTGGTAGTTCTTCGTCGGTTCCGAGCTTGCCGTATCAGGCGGCTTCTTTTTCTGACATGGACAAGTCCGTCATGTCTGACATTGCCGGGAATGCCTTGGACGAGTTGCTCAGGCTTTTGCAGACGAATGAACCCTTGTGGATGAAGTCAAGCACCGACGGGAGAGATGTTCTCAATCTTGACACCTATGGAAACATGTTCCCCAGATCGAATAGTCACCTTAAGAACCCCAATGTTCGCATTGAAGCGTCTCGAGATTCTGGAGTTGTCATTATGAATAGCTTGGCTTTGGTCGACATGTTTATGGACCCCAACAAGTGGATGGAGCTATTTCCTACAATAGTTTCAATGGCAACAACGATCAAAGTGATATCTTCTGGAATGCTTGGTGGTCATAGTGGTGCTTTGCAATTGATGTATGGAGAGCTTCATGTGCTTTCTCCACTGGTTCCGACTCGAGAGTTCTATTTCCTGCGTTATTGTCAGCAAATTGAGCAAGGCTTATGGGCGATAGTGGATGTGTCTTATGATTTTCCTCAAGATAATCAGTTTGCTCCTCAGTTTCGGTCTCATAGATTCCCTTCTGGTTGCTTGATCCAGGATATGCCTAATGGGTATTCAAAGGTGACTTGGGTTGAGCATGTTGAGATTGAAGATAAAACGCCAACTCATCGTCTCTACAGAAATCTTATTTACAGTGGATTGGCTTTTGGAGCAGAAAGATGGCTCGCTACACTTCAAAGAATGTGCGAAAGATTCGCTTGTTTAATGGTTACAGGCAATTCAACTCGTGATCTTGGAGGAGTGATTCCGTCGCCGGAAGGCAAGAGGAGCATGATGAAACTGGCACAAAGGATGGTAACCAATTTCTGCACGAGCATCAGTTCATCGATCGGCCATAGATGGACGACACTTTCTGGGTTTAACGAGGTCGGGGTCAGAGTCACCGTCCACAAGAGCTCCGATCCCGGCCAACCAAACGGCGTCGTTCTCAGCGCAGCCACCACCATCTGGCTCCCGATCCCTCCCCAGACCGTCTTTAGTTTCTTCAAGGACGAACGAAAAAGACCTCAGTGGGATGTTCTTTCGAATGGGAATGCAGTGCAAGAGGTTGCTCATATAGCCAATGGATCTCACCCTGGAAACTGCATATCTGTTCTTCGAGCCTTCAACACGAGCCAGAACAACATGTTGATACTGCAAGAGAGTTGCGTGGACACATCAGGATCCCTGGTGGTGTACTGCCCGGTGGATCTGCCGGCGATCAACATCGCCATGAGCGGTGAGGATCCGTCGTACATTCCTCTACTGCCGTCGGGCTTTGTGGTGTCGCCAGACGGGCAAGTGGAGCAAGGTGGAGCCGCTGGAGTGGGGGACGGAGCATCGAGCAGCTCGAGCACACCAAGGAGGTCAGGAGGGTCACTGATCACGGTGGCGTTTCAGATTCTGGTGAGCAGCCTGCCATCTGCGAAGCTGAACTTCGAGTCAGTGACGACCGTTAATAACCTCATCGGCACCACTGTGCAGCAAATTAAGGCAGCCTTGAATTGTCCTACTTCCTGA 2175 0.4956 MEYGSGGGGGSPGDHHHHHHHLHDGSDSQRNKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPLHEESYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGSFGGQTVMGGGPSLDLDLLPGSSSSVPSLPYQAASFSDMDKSVMSDIAGNALDELLRLLQTNEPLWMKSSTDGRDVLNLDTYGNMFPRSNSHLKNPNVRIEASRDSGVVIMNSLALVDMFMDPNKWMELFPTIVSMATTIKVISSGMLGGHSGALQLMYGELHVLSPLVPTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQFAPQFRSHRFPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRNLIYSGLAFGAERWLATLQRMCERFACLMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCTSISSSIGHRWTTLSGFNEVGVRVTVHKSSDPGQPNGVVLSAATTIWLPIPPQTVFSFFKDERKRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCVDTSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFVVSPDGQVEQGGAAGVGDGASSSSSTPRRSGGSLITVAFQILVSSLPSAKLNFESVTTVNNLIGTTVQQIKAALNCPTS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1679 724 Pfam START domain 232 456 IPR002913 GO:0008289
Prci1g1679 724 Coils Coil 137 157 - -
Prci1g1679 724 SUPERFAMILY Bet v1-like 223 457 - -
Prci1g1679 724 SMART START_1 231 456 IPR002913 GO:0008289
Prci1g1679 724 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Prci1g1679 724 CDD homeodomain 32 90 IPR001356 GO:0003677
Prci1g1679 724 MobiDBLite consensus disorder prediction 656 675 - -
Prci1g1679 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 720 IPR042160 -
Prci1g1679 724 FunFam Homeobox-leucine zipper protein HDG1 19 105 - -
Prci1g1679 724 SUPERFAMILY Bet v1-like 477 716 - -
Prci1g1679 724 Gene3D - 16 103 - -
Prci1g1679 724 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Prci1g1679 724 Gene3D - 231 455 IPR023393 -
Prci1g1679 724 Pfam Homeodomain 32 87 IPR001356 GO:0003677
Prci1g1679 724 SMART HOX_1 31 93 IPR001356 GO:0003677
Prci1g1679 724 ProSiteProfiles START domain profile. 222 459 IPR002913 GO:0008289
Prci1g1679 724 MobiDBLite consensus disorder prediction 1 38 - -
Prci1g1679 724 FunFam Homeobox-leucine zipper protein GLABRA 2 231 455 - -
Prci1g1679 724 SUPERFAMILY Homeodomain-like 11 89 IPR009057 -
Prci1g1679 724 CDD START_ArGLABRA2_like 226 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1679 Prci-Chr1 36560234 36563835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1679 27 724 Homeobox Transcription Factor Family AT1G73360 68.600 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci1g1679 START 7e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1679 K09338 - gmx:100809075 1183.7