Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1673 ATGGCCAGTAGCTGCCTTCCAGACGGCAGCACAAAATCTGAAACTGTTATCTGTAAGAAGGATGTGACTATAACTACTACAGGAGACAATTTTACTCCCAAGGCAAGGAAACCATATACCATTACCAAGCAAAGGGAAAAGTGGACCGAGGAAGAGCATCAGAAGTTCCTTGAAGCTTTGAAACTGTATGGCCGTGGTTGGCGTCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAAATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGTTGTTTCAGGTTGTGCGGGAATCTGATGGTAGCACTGAAAGTTCTGTAAAGCCAATTGACATACCTCCTCCTCGGCCAAAAAGGAAACCATTGCATCCATATCCACGCAAATCTGCTGACTCGTTCAAAGGACATTCAAATGAGTCAGAAAGATCTCCATCGCCAAACATGTCAGCTGCAGTGAAAGACACCCAATCTCCAACTTCAGTGTTATCTGCATTTGGTTCAGAAGCATTCGGATCAGCATTCTCTGAACAGACGAATAGATGTCCTTCCCCTAATTCTTGCACTACTGACATCCACTCGATCCACTTATCTCCAGTCGGAAAGGAAAATGATTGTATTACGTCCATTTCGTCTGAGGAACAGACGGGATATTTAGCTTCTGTCCCTTCAATTGCTGATTTGAAGAAAGATCTCTCCCTGAAGGTTGAGTTGACTTCAGAGAAAAACGAGAATTCTACTGAAGATGATACCAAAATGCCACAGGTCACAAGCATTAAACTTTTTGGAAGAACTGTCTCCTTGACAAATAATCAGACGTCAGTGAATATAGATGAGGACAGAATTCAGTCAGTTATATGTAAGGAAAACACTTGCTCTGTTGAGTCAGGATTTGATGATTCTTTACCAAGCTGGAACTTACACCAAAGTCTTCCAGACTTCGACCTTGGGCTGCGAAACAAAATTTTTAATCTTGCACCTCATCATACCTCCCTCAAAGAGAGAGTGATTGAGAAGGAAAGTCATTGTATAGATTATAACACTGAATCAGTTAGTGAAATGGAAAATGGAGACAAGTTGGATGCTTTTGATTCTCAATGTCAATCATCCCACCATCAGGGAAGAACCTCCTCCAAATCTCCACGAGGGTTCATGCCATATAAAAGATGTTTAGCTGAGAGAGATGTGAATGCGTTTGTTGATGGATTGGAAAAGAGGAAGGCGCAACGAACTCGAGTGTGCTCATAG 1248 0.4207 MASSCLPDGSTKSETVICKKDVTITTTGDNFTPKARKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKLFQVVRESDGSTESSVKPIDIPPPRPKRKPLHPYPRKSADSFKGHSNESERSPSPNMSAAVKDTQSPTSVLSAFGSEAFGSAFSEQTNRCPSPNSCTTDIHSIHLSPVGKENDCITSISSEEQTGYLASVPSIADLKKDLSLKVELTSEKNENSTEDDTKMPQVTSIKLFGRTVSLTNNQTSVNIDEDRIQSVICKENTCSVESGFDDSLPSWNLHQSLPDFDLGLRNKIFNLAPHHTSLKERVIEKESHCIDYNTESVSEMENGDKLDAFDSQCQSSHHQGRTSSKSPRGFMPYKRCLAERDVNAFVDGLEKRKAQRTRVCS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1673 415 Gene3D - 47 93 - -
Prci1g1673 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 94 IPR017930 -
Prci1g1673 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 92 IPR006447 GO:0003677
Prci1g1673 415 SMART sant 44 92 IPR001005 -
Prci1g1673 415 MobiDBLite consensus disorder prediction 140 158 - -
Prci1g1673 415 ProSiteProfiles SANT domain profile. 43 94 IPR017884 -
Prci1g1673 415 SUPERFAMILY Homeodomain-like 39 93 IPR009057 -
Prci1g1673 415 MobiDBLite consensus disorder prediction 114 139 - -
Prci1g1673 415 FunFam protein REVEILLE 6 isoform X1 47 95 - -
Prci1g1673 415 CDD SANT 47 90 IPR001005 -
Prci1g1673 415 MobiDBLite consensus disorder prediction 101 158 - -
Prci1g1673 415 PANTHER SWI/SNF COMPLEX-RELATED 27 314 - -
Prci1g1673 415 ProSiteProfiles Myb-like domain profile. 40 90 IPR001005 -
Prci1g1673 415 Pfam Myb-like DNA-binding domain 45 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1673 Prci-Chr1 36518175 36521777 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci1g1673 Myb_DNA-binding 7.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1673 - - pcin:129319842 815.839