Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1669 ATGGTGTTCGGGATGACTGAAGAGTCTTCCATCTACAACAAGAAGAAGAGGAAAAAAGAAGAGGCAGGCAAAGACTACATGGCAAGGGTCGGGTTACCACCGGGTTTTCGGTTCCATCCCACGGATGAAGAGCTTGTCAATTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGACATCATTCCTGAGATTGATCTCTACAAATGTGAACCTTGGGAACTTGCAGACAAGTCATTTCTGCCAAGTAGAGATCCAGAGTGGTACTTTTTTGGACCCAGAGACAGGAAATACCCTAACGGTTTCAGAACTAACAGAGCCACTAGAGCTGGGTACTGGAAGTCCACAGGCAAAGACAGAAGGGTCAGTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAAAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCATGAGTACCGCCTCGACGACAAAGAATCTGAGGACATCTCCGGGATACAGGATACTTATGCATTGTGCCGTGTATTCAAGAAAAATGGAATCTGCTCTGAAATTGAAGATCAAGGGCAGAGTAGTTTAACACTAGTTGAGAGCTCACAAACCATAAATATTAATAATGAAAGTGAAACCATGTCTCCAGACCCAGCTGGGGCATCTTCTTCATGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGACGCATGGTATCCTTCTAATACAGCCATGGCAGGTTGTGAAGAAGTTTCTCATTTTACATTCACAAACTGA 798 0.4386 MVFGMTEESSIYNKKKRKKEEAGKDYMARVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQNRPIGMKKTLVYYKGRAPQGIRTDWVMHEYRLDDKESEDISGIQDTYALCRVFKKNGICSEIEDQGQSSLTLVESSQTININNESETMSPDPAGASSSCLEEEDKDDSWMQFITDDAWYPSNTAMAGCEEVSHFTFTN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1669 265 SUPERFAMILY NAC domain 26 182 IPR036093 GO:0003677|GO:0006355
Prci1g1669 265 Gene3D NAC domain 41 185 IPR036093 GO:0003677|GO:0006355
Prci1g1669 265 MobiDBLite consensus disorder prediction 208 228 - -
Prci1g1669 265 FunFam Nac domain-containing protein 86 41 185 - -
Prci1g1669 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 31 215 - -
Prci1g1669 265 ProSiteProfiles NAC domain profile. 32 182 IPR003441 GO:0003677|GO:0006355
Prci1g1669 265 Pfam No apical meristem (NAM) protein 33 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1669 Prci-Chr1 36486576 36490126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1669 27 253 NAC Transcription Factor Family AT3G17730 76.987 2.74e-130 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g1669 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1669 - - gmx:100788036 443.736