Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1651 ATGAACCACAAAGCCTCCGTCTCTAAGGAGCTCAATGACAAGTTTACCAAGATCTTAGAGGGCCTACTTAAACTTCCTGAAAACAAGGAATGTGCTGACTGCCGAAACAAGGCACCACGATGGGCAAGTGTGAATCTAGGAATTTTCATATGCATGCAGTGCTCAGGAATTCACCGAAGTCTTGGGGTGCATATATCAAAGGTGCGTTCTACAACTTTGGATACATGGTTGCCAGAACAAGTCTCTTTCATGCAATTCATGGGTAATGAGAAGTCAAATGCGTATTGGGAAGCAGAACTGCCACCAAATTTTGATAGAATTGGCTTTGGGCTCGAGAAGTTTATTTGTTCCAAGTATGTGGAGAAAAGGTGGGCTAAAATTGGTGGAGTAAATCCAGCTTCAAAAGCAGGTGAAATAATCTGTAATCTGAATCTGAATGTGCCACCAGCTGGTCCCAAGGTTGGCTTTTCAAGGGCTAATAGGAGACTTTCTCTTGAGGAAAGCATTCTCACAAGCCACATGGAACAGATCCTGCCTCCGGTGACAAGACATCGTGGGGGTTCTCTTGACATTCCAAAAAGTACCACCCCTCCTCCAGTAAGGAGGCACTACCCATCACTTGATTTTGACAATTCCCCGGTAAACAATGGCAATGCTGACTTTTTCAGCATGTTTGGCATCCATGGTGATAAGAAGGACACCGTAACTGTACCTCCCACTAGCTGGACAACATTTGACTGA 741 0.4467 MNHKASVSKELNDKFTKILEGLLKLPENKECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNEKSNAYWEAELPPNFDRIGFGLEKFICSKYVEKRWAKIGGVNPASKAGEIICNLNLNVPPAGPKVGFSRANRRLSLEESILTSHMEQILPPVTRHRGGSLDIPKSTTPPPVRRHYPSLDFDNSPVNNGNADFFSMFGIHGDKKDTVTVPPTSWTTFD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1651 246 SMART arf_gap_3 16 132 IPR001164 GO:0005096
Prci1g1651 246 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 200 IPR044520 GO:0005096
Prci1g1651 246 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
Prci1g1651 246 SUPERFAMILY ArfGap/RecO-like zinc finger 16 125 IPR037278 -
Prci1g1651 246 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Prci1g1651 246 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Prci1g1651 246 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Prci1g1651 246 Pfam Putative GTPase activating protein for Arf 17 126 IPR001164 GO:0005096
Prci1g1651 246 Gene3D Arf GTPase activating protein 1 128 IPR038508 -
Prci1g1651 246 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
Prci1g1651 246 CDD ArfGap 19 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1651 Prci-Chr1 36253683 36259096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1651 19 126 C2H2 Transcription Factor Family AT4G05330 43.860 1.18e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1651 K12486 - gmx:100780727 335.88