Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1650 ATGCAGATCTTAGAGGGCCTACTTAAACTTCCTGAAAACAAGGAATGTGCTGACTGCCGAAACAAGGCACCACGATGGGCAAGTGTGAATCTAGGAATTTTCATATGCATGCAGTGCTCAGGAATTCACCGAAGTCTTGGGGTGCATATATCAAAGGTGCGTTCTACAACTTTGGATACATGGTTGCCAGAACAAGTCTCTTTCATGCAATTCATGGGTAATGAGAAGTCAAATGCGTATTGGGAAGCAGAACTGCCACCAAATTTTGATAGAATTGGCTTTGGGCTCGAGAAGTTTATTTGTTCCAAGTATGTGGAGAAAAGGTGGGCTAAAATTGGTGGAGTAAATCCAGCTTCAAAAGCAGGTGAAATAATCTGTAATCTGAATCTGAATGTGCCACCAGCTGGTCCCAAGGTTGGCTTTTCAAGGGCTAATAGGAGACTTTCTCTTGAGGAAAGCATTCTCACAAGCCACATGGAACAGATCCTGCCTCCGGTGACAAGACATCGTGGGGGTTCTCTTGACATTCCAAAAAGTACCACCCCTCCTCCAGTAAGGAGGCACTACCCATCACTTGATTTTGACAATTCCCCGGTAAACAATGGCAATGCTGACTTTTTCAGCATGTTTGGCATCCATGGTGATAAGAAGGACACCGTAACTGTACCTCCCACTAGCTGGACAACATTTGACTGA 696 0.4468 MQILEGLLKLPENKECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNEKSNAYWEAELPPNFDRIGFGLEKFICSKYVEKRWAKIGGVNPASKAGEIICNLNLNVPPAGPKVGFSRANRRLSLEESILTSHMEQILPPVTRHRGGSLDIPKSTTPPPVRRHYPSLDFDNSPVNNGNADFFSMFGIHGDKKDTVTVPPTSWTTFD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1650 231 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 122 IPR001164 GO:0005096
Prci1g1650 231 Pfam Putative GTPase activating protein for Arf 3 111 IPR001164 GO:0005096
Prci1g1650 231 CDD ArfGap 4 104 - -
Prci1g1650 231 PRINTS HIV Rev interacting protein signature 32 49 IPR001164 GO:0005096
Prci1g1650 231 PRINTS HIV Rev interacting protein signature 53 74 IPR001164 GO:0005096
Prci1g1650 231 PRINTS HIV Rev interacting protein signature 13 32 IPR001164 GO:0005096
Prci1g1650 231 SUPERFAMILY ArfGap/RecO-like zinc finger 2 110 IPR037278 -
Prci1g1650 231 Gene3D Arf GTPase activating protein 1 113 IPR038508 -
Prci1g1650 231 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 2 185 IPR044520 GO:0005096
Prci1g1650 231 SMART arf_gap_3 2 117 IPR001164 GO:0005096
Prci1g1650 231 FunFam stromal membrane-associated protein 1 isoform X1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1650 Prci-Chr1 36253682 36259096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1650 4 111 C2H2 Transcription Factor Family AT4G05330 43.860 1.02e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1650 K12486 - gmx:100780727 316.235