Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1609 ATGGCTCATATATATTCTTCTGCTCAAGGATGGAACTATGATGTGTTCCTGAGTTTCAGAGGCGCAGATACCAGAAGAAGTTTCACAGGCTTTCTGTATCATGCTCTGTGTCAGAAGGGCATTAACGCATTCATAGATGATGAGGAGCTCAAGAGAGGAACAGAGATTTCTCCATCTCTTGTTAAAGCAATTGAAGATTCAAGGATTTCTATCATTGTATTCTCTGAAAACTATGCTTCTTCCACATGGTGTCTTGAGGAGCTAGTTAAGATCCTTGATTGTATGAAAGTCAAGGGGCAATTGGTTTTGCCAGTTTTTCACTATGTAGATCCCTCTGTGGTACGCCATCAAAAAGGAAGTTTTGGCATAGCCATGGCCAAGCATGAAGACAGATTCAAGAATAATATGGAGAAGGTGCAGAAATGGAAGTTGGCTTTGTCTGAAGCAGCTAACTTGTCTGGTTGGAGCTTAGAAAATGGGTATGAATTTGAGCTCATTCAAAGGATTGTTGAAGAGGTCTCTAGCAAATTAAATCACACCCTTTTGCACATTGCTGAATATCCAGTTGGACTGGAGACTCGTTTATCAGATGTGAAATCACTTTTGCAAATGGAGCTTGGTGAACGTATTCGAATGATAGGAATCTATGGATTTGGAGGCATAGGAAAAACAACAATTGCTAGAGCTCTATTTAACTTGATTGCTAATCAATTTGATGCTGCATGTTTTCTTGCTGATATTAGAGAAAGTTCAAATCAACCAAAAGGTTTAGCACAGCTCCAAGAAGCACTTCTTTTTGATTTAGTTGGAGACAAGAACATTAAGCTAGGAAATATTTACAAAGGAATCCCCATTTTGAAGAAAAGATTGTGCTGCAAAAAAATCCTTTTGATTCTTGATGATGTTGACAAATTAGAGCAGTTACAAGCTTTAGCAGGAGGAAGAGATTGGTTTGGTGTTGGGAGTGTAATTGTGATCACAACAAGAGATAAACACTTGCTAGTTACTCATCAAGTTGAAAAAACATACGAGGTAAAGCAACTACACCATAGTGAAGCATTTGAATTGTTCACTTGGAACGCCTTCAAAAGAAAATCACCAGATTTAGGTTATTTTGAGATTTCAAACAGTGTGGTTCTATATGCTGAAGGGCTTCCACTGGCTTTGAAAGTAATGGGTTCAAATTTGTATGGTAAAACAGTGGATGAGTGGAAATCTGCATTGGACAAATATGAAAAGATTCCCAACAAAGAGGTTCAAAATGTACTCAGAGTAACCTATGATAATCTGGAGGACAATGAGAAAGAAATTTTCCTAGACATAGCATGCTTCTTCAAAGGAGAGACAGTAGAATATGTTGAAAAGACACTAAAAGCTTGTGGCTTCTACCCAAAATTTGGTATTAGTGTACTAATTGATAGGTCTCTTATAACTATTGATGAGTATAATAGATTAAGAATGCATGATCTGATTCAAGACATGGGAAGAGAAGTTGTAAGAGAAGATTCTCCATTAGAGCCAGGAAATCGGAGTAGAATATGGTACCCTGAAGATGTTTATGAAGTACTCACACAAAATACAGGGTCAAGCAAAATTCAGGGCATGATGGTGGACCTCCCAGATCATTATTTGGTACATTTGACAGAAAACACCTTCAAAATGATGAAAAATATGAAAATTCTTATAGTTAAAAATGCACACGTTTTTGGAAGCCCTCAACATCTTCCAAACAATTTAAGATTGCTTGATTGGATGGAATACCCCTCATCATCATTACCATCCAACTTTCATCCGAGAAAACTTGTTGTCCTCAACTTATCTCGTAGTTGTTTAAACATGCAGGAGCCATTCAAGTATTTGGACTCTTTGACATCTATGGATTTGAGCCAATGTGATTGCTTAACAAAACTACCTGACATTTCTGGAGTTCCAAATTTGACAGAATTAAATCTTGATTACTGTGCAAATTTAGAAGAGGTTCATGATTCTGTTGGATTTCTTCAGAAACTTGTAGAGTTGAGGGCTTCCGGATGCACCAAACTAAGGGAATTTCCACGTGTCATTAGCTTGCCATCACTCAAAAGTTTGATCCTTATATGGTGTTCAAGCATTCAAAAATTTCCAGATATCCAAGGAAAAATGAAGAATCTTGTATCCATTTCTATTGAAAACAGTGGAATAGAAGAATTACCAGCTTCCATTGGAAACCTCAGTGGACTTCAAGAACTATGTATGACATCTTGTTTAAGTCTCAAGGAACTACCAGAAGAAATTGACATGCTACAAAATCTAAGAGACCTTAACATTGAGGGATGTCCACAACTCCGAAATTTTTTAAAGAAGTTGCAAGAAATGGGACAACAAGCCCCTACCTTTCATAATGTTGATTCATTGAATCTAGAAAACTGTGGCCTATTAGATGAAGATCTTCCCATAATTTTATACTCTTTTCCCAAGCTGACTTCACTAGACCTTTCAAGGAACAAATTTGTAATGCTTCCATCCCGCATGCAGGAGTTTCTTTACTTGCAGTTACTTCACGTAGACAGTTGCAAGTTTCTCCAAGAAATTCCAAGCTTACCTCCTGATTTAAGATTCATTAATGCAACAAATTGCACATCATTGAATGCAGAGTCATCAAATTTACTATTGAGTCAGGAAACCTTTCAGGAAAGGGAGTTACATGTTGTGGTGCCTGGAGCAAGCATTCCAATGTGGTTTGATCTCTGCAACAAAGGAAAATATATGACGTTTTGGGTTCGTGAAAAATTTCCAGTGATTTCTCTATGTTATGTTTTTGCAGTAGAGGGTGAAATGAAGGAGGGTCTCAGTTGTCAAGTTCACTTTTTTATTAATGGTGAAGAATTGTTTGAATTGGAAATACCAACAAGCTTTTCAAAAATGATGACAGATCATGTGTGGCTATTTGATTTGCAAACTCTACCATCCTTCCAGGGGAATCCGTGTGATTCCTACTTGGATGATAATTGGAATCAGGTGGAGATTTCTTGTGAGAAAATGTCTAAAGTTCCAAATGTAAATGTTAGCTGGTGTGGTATTCATGTAAGCAAGCAAGGACAAAATGAGATAAGATTCACAGACCCTTACTCGGAATCAGATTCTATCACAGAATCTGATAACAATGAGGCTGAATTGAAGATGATCATTAGTAATGACAATTCAATGGAAGATTTTCAAGTCTTTAAAGACAATTGTTGCAATGTCAATGATAACTTGGAAGCCACTGATACAGAGGATAGCAAAATGCTTGAACGCTGGGGAAATGAGCGAAACATAGCTCAAAGTGATGAGGAAATGGAAGCATTTTATGCTTCTTTAGATATTGAAACCTTTGATCCATTACCTTCAAAAGATATCACATCTATTTCTGAAATGGAAACATGTACCAAACCAAGTGAAGGAATCCAGAAAGCGTGGAAGACATTTCAAGAGTTTCTCACCAAAGATTTTTCTGACATGTTGAAGCTTGAAAATTATAGCGCCATGAAAGCTGCATTAGATTGCCTCTCTGGATTATCTGCAGATGATGGAGTGTCAGTAGAAATGAGATCAGTGATAATAGAAGTTTCAAGGGAATTCACTCATTGGAGCTGGGATTATAGCAATGCAAGCAAGAAAATGGAGATTGCCAAAACCAGCATGTTGAAAGTGCATGAAATAGATGAGGGTCTCGAAGCTAACAAGAGCCATTTCAAGGAAGTGATGATCACGAAAAATGAGTTGCAAAACCAGCTGGCTTATTTGGAGGAGAGAAAGAAAGAGCTAGAGGATCAAATCAGTGCGATTAAGTCTGACATCAGTACTTTTGATTCAGCTCAGAAAATGGCTACTAAGAGAAAGAGAGAAATTTTCGAGGAAGGAAAGTTGCTCATAGCTCAAAGAGATGAGTTGAGAGAACAATTGCCACTCTTGAGGTATGACTGGGCACTAGCAAAGAACATCCAAACAAATATCAGTACTGAATGGTCAAAACTTAGAGAAAAAATAAATAACAAAAGCATAGGTGTTTTTCTCAGTGAAATGTAG 4047 0.3731 MAHIYSSAQGWNYDVFLSFRGADTRRSFTGFLYHALCQKGINAFIDDEELKRGTEISPSLVKAIEDSRISIIVFSENYASSTWCLEELVKILDCMKVKGQLVLPVFHYVDPSVVRHQKGSFGIAMAKHEDRFKNNMEKVQKWKLALSEAANLSGWSLENGYEFELIQRIVEEVSSKLNHTLLHIAEYPVGLETRLSDVKSLLQMELGERIRMIGIYGFGGIGKTTIARALFNLIANQFDAACFLADIRESSNQPKGLAQLQEALLFDLVGDKNIKLGNIYKGIPILKKRLCCKKILLILDDVDKLEQLQALAGGRDWFGVGSVIVITTRDKHLLVTHQVEKTYEVKQLHHSEAFELFTWNAFKRKSPDLGYFEISNSVVLYAEGLPLALKVMGSNLYGKTVDEWKSALDKYEKIPNKEVQNVLRVTYDNLEDNEKEIFLDIACFFKGETVEYVEKTLKACGFYPKFGISVLIDRSLITIDEYNRLRMHDLIQDMGREVVREDSPLEPGNRSRIWYPEDVYEVLTQNTGSSKIQGMMVDLPDHYLVHLTENTFKMMKNMKILIVKNAHVFGSPQHLPNNLRLLDWMEYPSSSLPSNFHPRKLVVLNLSRSCLNMQEPFKYLDSLTSMDLSQCDCLTKLPDISGVPNLTELNLDYCANLEEVHDSVGFLQKLVELRASGCTKLREFPRVISLPSLKSLILIWCSSIQKFPDIQGKMKNLVSISIENSGIEELPASIGNLSGLQELCMTSCLSLKELPEEIDMLQNLRDLNIEGCPQLRNFLKKLQEMGQQAPTFHNVDSLNLENCGLLDEDLPIILYSFPKLTSLDLSRNKFVMLPSRMQEFLYLQLLHVDSCKFLQEIPSLPPDLRFINATNCTSLNAESSNLLLSQETFQERELHVVVPGASIPMWFDLCNKGKYMTFWVREKFPVISLCYVFAVEGEMKEGLSCQVHFFINGEELFELEIPTSFSKMMTDHVWLFDLQTLPSFQGNPCDSYLDDNWNQVEISCEKMSKVPNVNVSWCGIHVSKQGQNEIRFTDPYSESDSITESDNNEAELKMIISNDNSMEDFQVFKDNCCNVNDNLEATDTEDSKMLERWGNERNIAQSDEEMEAFYASLDIETFDPLPSKDITSISEMETCTKPSEGIQKAWKTFQEFLTKDFSDMLKLENYSAMKAALDCLSGLSADDGVSVEMRSVIIEVSREFTHWSWDYSNASKKMEIAKTSMLKVHEIDEGLEANKSHFKEVMITKNELQNQLAYLEERKKELEDQISAIKSDISTFDSAQKMATKRKREIFEEGKLLIAQRDELREQLPLLRYDWALAKNIQTNISTEWSKLREKINNKSIGVFLSEM 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1609 1348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 709 IPR044974 GO:0006952
Prci1g1609 1348 Coils Coil 1238 1272 - -
Prci1g1609 1348 Gene3D Ribonuclease Inhibitor 707 890 IPR032675 -
Prci1g1609 1348 Pfam NB-ARC domain 198 422 IPR002182 GO:0043531
Prci1g1609 1348 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Prci1g1609 1348 Gene3D - 347 431 IPR042197 -
Prci1g1609 1348 Gene3D - 176 343 IPR027417 -
Prci1g1609 1348 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Prci1g1609 1348 SUPERFAMILY "Winged helix" DNA-binding domain 418 523 IPR036390 -
Prci1g1609 1348 Gene3D Ribonuclease Inhibitor 523 706 IPR032675 -
Prci1g1609 1348 PRINTS Disease resistance protein signature 382 396 - -
Prci1g1609 1348 PRINTS Disease resistance protein signature 618 634 - -
Prci1g1609 1348 PRINTS Disease resistance protein signature 212 227 - -
Prci1g1609 1348 PRINTS Disease resistance protein signature 289 303 - -
Prci1g1609 1348 Pfam TIR domain 12 181 IPR000157 GO:0007165
Prci1g1609 1348 SUPERFAMILY L domain-like 535 881 - -
Prci1g1609 1348 SMART till_3 12 152 IPR000157 GO:0007165
Prci1g1609 1348 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Prci1g1609 1348 Gene3D - 6 175 IPR035897 -
Prci1g1609 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1609 Prci-Chr1 35807799 35813158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1609 5 888 WRKY Transcription Factor Family AT4G12020 30.778 3.09e-94 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1609 - - psat:127127957 1697.95