Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1605 ATGAATTTTAAAAGATGTAAATTTTTACAGTGTATACCAAACTTATCTGGAGTTTCCAATTTGATCGTATTATGTCTTGATGATTGTACAAACTTAATTGAAATTCATAATTCAGTTGGACTTCTAACTAAGTTGAGAGAATGGAGTGCCATGCGATGCAAAAACTTGAGGATCTTACCATATGGCCTTAGGTTGACATCTCTTGAACATCTCAACCTCTTTGGTTGCTCAAGTCTTCAACATTTTCCAAAAATATTAGAGAAAATGACAAAGATGAGAATGCTTGATTTGGATAGGACGTCCATTGTAGAATTGCCATCCTCAATTTGCAATCTCATCGGGCTTGAAATCTTAAACATGGAAGAGTGTCATCATCTTAAGCGACTACCAGCTAGCATTTTTATGTTGCCAAACCTATGCACACTAAGAGCAAATTCTTGTGAGGGAATGAGATATTTCAAGAAATGTGAAGTTGGAGACGAAGCAAGCTTAGACCACTCTACAGCATCTCTGAAATTGGAATACTTCTATTTCTCAAATTGCAATTTGTCAAATGGTTCTCTTGCTCTGTGTCTTTATTACCTCCCAAACTTGATATATTTAGATCTAAGTTGTAATAACTTCACAGTCCTTCCAGCGTGCATCAAAGAATGTTACTGTTTGAGATATCTTATCCTGGATCATTGCAAGGAGATTAAACATATCTCAGGAATGCCACCAAACCTAGAAAAATTTAGTGCTATATGTTGCACATCATTGACTGAGTCATCAAAAAGCAAAGTATTGAATCAGGCAATCTACGATCAACACGGTAAAAGATACTTTGTTTTTCCAGACAAGAAGTTCCCAGAAATGCTCGACATAGTTAGTACTGAAGATACCTCAATATCTTTTTGGATCCGTAAAGAGTTCCCAGTGATTCTTATTTGGATACTTGTTAAAGATGTCCAGGATTCTCTGTTCGACTTTAAATTCTCGGTGCATGTAAATGTCTCTCGTCAAGATATTCCTTCAGAGTGGTTCTCATCAGTATCAACAATAAAGGGTGATCATATATATCTGTGTGACCTGTACAGCATTATTCACAAGACTGAATTCTCCCAAGCACGTGATTGGAATGAAGTGTTTGTTTCCGTCGATAATAATACACATGAAAGGCAGCATGAAAGAAAAATTAATTTGGGAGTTCATGTATGCAAACAAGAAAATAGGTTGGAAAATATTCGGTTCACGGAACCAGAAAGATATGATGTCTTTGTAAGTTTCATAAGCACAGATGCAACAAGTTTAGTGAGCTCTCTGAATCATGCTCTACGTGCATGCGGAATAAATACATTCAATCTTGTTTACGGCATCCCAAGGAGGGGAAATGTTGACCCATTTGCCCTTAAAGTAATTGAAAACTCTAGGAGTTGTATAATTATATTCTCTAAAAACTACGCAATTTCCATGGGGTGTCTTGAGGAACTTGTTAAGAGCCTTGATTGTATGAGAACAAAGGGCACGTTGGTTTTTCCAGTTTACTACAATGTATCCCCTTCAGATATACAACGTCAAAGAAGAGGACATCGAAAAGCATCAAGGGATATAGCCAAATTCTATAATATGGACATGAAAATGGTGCAAAAGTGGAGGTTGGCTTTGTCTGAAGCAGCCAACATGTCTGGTTTTTGGACAAACAAAAGGAGTGATTCTGAGGTTATCAAAAGTATTGTTGAAGAAGTCTCTCATGCATTGCTGAATACCTAG 1749 0.3676 MNFKRCKFLQCIPNLSGVSNLIVLCLDDCTNLIEIHNSVGLLTKLREWSAMRCKNLRILPYGLRLTSLEHLNLFGCSSLQHFPKILEKMTKMRMLDLDRTSIVELPSSICNLIGLEILNMEECHHLKRLPASIFMLPNLCTLRANSCEGMRYFKKCEVGDEASLDHSTASLKLEYFYFSNCNLSNGSLALCLYYLPNLIYLDLSCNNFTVLPACIKECYCLRYLILDHCKEIKHISGMPPNLEKFSAICCTSLTESSKSKVLNQAIYDQHGKRYFVFPDKKFPEMLDIVSTEDTSISFWIRKEFPVILIWILVKDVQDSLFDFKFSVHVNVSRQDIPSEWFSSVSTIKGDHIYLCDLYSIIHKTEFSQARDWNEVFVSVDNNTHERQHERKINLGVHVCKQENRLENIRFTEPERYDVFVSFISTDATSLVSSLNHALRACGINTFNLVYGIPRRGNVDPFALKVIENSRSCIIIFSKNYAISMGCLEELVKSLDCMRTKGTLVFPVYYNVSPSDIQRQRRGHRKASRDIAKFYNMDMKMVQKWRLALSEAANMSGFWTNKRSDSEVIKSIVEEVSHALLNT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1605 582 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 416 579 IPR044974 GO:0006952
Prci1g1605 582 SUPERFAMILY L domain-like 3 259 - -
Prci1g1605 582 Gene3D - 410 581 IPR035897 -
Prci1g1605 582 SUPERFAMILY Toll/Interleukin receptor TIR domain 412 557 IPR035897 -
Prci1g1605 582 SMART LRR_typ_2 89 112 IPR003591 -
Prci1g1605 582 SMART LRR_typ_2 195 218 IPR003591 -
Prci1g1605 582 Gene3D Ribonuclease Inhibitor 1 81 IPR032675 -
Prci1g1605 582 Pfam TIR domain 416 579 IPR000157 GO:0007165
Prci1g1605 582 ProSiteProfiles TIR domain profile. 414 579 IPR000157 GO:0007165
Prci1g1605 582 Gene3D Ribonuclease Inhibitor 82 264 IPR032675 -
Prci1g1605 582 SMART till_3 415 554 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1605 Prci-Chr1 35759385 35767157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1605 409 575 WRKY Transcription Factor Family AT4G12020 26.744 9.17e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1605 - - pcin:129313132 575.859