Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1604 ATGGCACAACAAGCAAGATCTTGTTCCCTCACTTACAAATGGACTTATGACGTGTTTCTTAGTTTTCACGGTGCAGATACTCGCTTAGGTTTCATTGGCTATCTCCGCGAGGCTCTGCGCCAAAGAGGAATTCATGTCTTCATTGATGATGAAGGCATCAGAACTGGAGAAGAAATCAAACCTGCACTTTTCAAAGCCATACGAGAATCAAGAATAGCGATCGTGGTTTTCTCTGAAAACTTTGCAAACTCGACCTTTTGCTTGGAAGAACTTGCAAAGATTCTGGAGTGCTTCAAGGAGGAAGGGCGGCTGATATATCCAATTTTTTATTATGTGGATCCATCGGAGCTTCGACGTCCAAGAGGAAGCTATGCAAAAGCATTGGCGAGACTAGAGAGACGATTCAAAGACAATCACGAGAAGGTGAAAAAATGGAGATTGGCTTTGTTCCAAGCTGCTAACTTGAAAGGCTTTCATCTAAAACCCAAGATTGCGGAAGAAAAAGATTATGTTACAAGGATCACTAGTGAAGTCTCTACTAGAATTAGCCGTATTCCTTTACATGTCACTGATTATCCAGTTGGACTTGCATCTCGAGTAAAGGAAGTAACTTCACTTTTAGATCTTTGGTCAAATGAGAAAATTAAAATGGTAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACTATTGCAAGGGCAGTGTATAATTCAGTTGCTGATTATTTTGAAGGCTTATGTTTCCTTTCTAATATAAGAGAGAAGTCTAAATCGTCAAATGGTTTGTCACATCTTCAGGAGATATTACTCAAGGAATTGGTCATGGAAAAAGATCTCAAATTGGGTGACATGAATAAAGGAATACCAATAATAGCACATAGGCTCTATCAGAAGAAGATTCTCTTGATTCTTGATGACATTAGCAAATCGAAACAGTTACAAGCACTAGCTGGAAGATGTGATTGGTTTGGTTCCGGAAGTAGAATCATAATCACCACAAGGAATAAACAATTGTTAGTAAGCCATGAGGTCCAAAGCATCTATCATGTCAAGGAATTAGATGATGAGGAATCTCTTCAATTGCTTAATTGGTACGCCTTTAAAAAGGAAAATGTGGAGATCGACTATGTAGAGGTTTCCAATCGAGCAATACTTTACTCATGTGGCTTTCCCTTAGCTTTAGAAGTGATTGGTTCTAATTTATGTGGTAAGAATGTCAACGAATGGAATTTTGCATTGGATCAATTTGAAAGAATACCACATGGAAGTGTTTTGGAGGTCCTTAAATTAAGCTATGATGCTTTAGAGGAAGAAGGGAAGAAAGTTTTCCTTGACTTGGCTTGCTTCTTCAATGGTGAGAAATTAAGAGATATCAGGGATATATTGCTATGTTCTCGTGGAATCCAACCAGAATATGCTATTGGAGTTTTGATTGATAAATCCCTCATAAAGATTGAAGGAGATCATGTAACAATGCACGACTTGATAGAAGATATGGGTAAAGAAATTGTTCGACAAGAATCACCTAATGAACCTGGCAGGCGCAGTAGGTTATGGTTCTATCAAGATATTTTTCATGTCTTACAACAAAATACCGGAACTAAGAATGTTGAAGCCATAATTCTAGACTCACCCAAAGGTAAAGAAGTACAATGGAGTGGAAAAGCATTCATGAAGATGAAAAACCTCAGAATTCTTATGATGAAAAATGCATTCTTTTCTCGAGGTGCCAAATATCTCCCAAATAGTTTAAGGGTGTTACAATGGAAGGATTATCACTTCAAAATTTTACCATATAACTTTTGTCCAACAAACTTGTCTATCTTGATTTGTCCAATAGTTGTTGTGAAATACTCCAACCCTTTGATAAGAAGTACGAGAACTTAA 1887 0.3763 MAQQARSCSLTYKWTYDVFLSFHGADTRLGFIGYLREALRQRGIHVFIDDEGIRTGEEIKPALFKAIRESRIAIVVFSENFANSTFCLEELAKILECFKEEGRLIYPIFYYVDPSELRRPRGSYAKALARLERRFKDNHEKVKKWRLALFQAANLKGFHLKPKIAEEKDYVTRITSEVSTRISRIPLHVTDYPVGLASRVKEVTSLLDLWSNEKIKMVGIWGAGGIGKSTIARAVYNSVADYFEGLCFLSNIREKSKSSNGLSHLQEILLKELVMEKDLKLGDMNKGIPIIAHRLYQKKILLILDDISKSKQLQALAGRCDWFGSGSRIIITTRNKQLLVSHEVQSIYHVKELDDEESLQLLNWYAFKKENVEIDYVEVSNRAILYSCGFPLALEVIGSNLCGKNVNEWNFALDQFERIPHGSVLEVLKLSYDALEEEGKKVFLDLACFFNGEKLRDIRDILLCSRGIQPEYAIGVLIDKSLIKIEGDHVTMHDLIEDMGKEIVRQESPNEPGRRSRLWFYQDIFHVLQQNTGTKNVEAIILDSPKGKEVQWSGKAFMKMKNLRILMMKNAFFSRGAKYLPNSLRVLQWKDYHFKILPYNFCPTNLSILICPIVVVKYSNPLIRSTRT 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1604 628 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 610 IPR044974 GO:0006952
Prci1g1604 628 Gene3D - 12 177 IPR035897 -
Prci1g1604 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Prci1g1604 628 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Prci1g1604 628 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Prci1g1604 628 Gene3D - 178 348 IPR027417 -
Prci1g1604 628 Gene3D - 352 436 IPR042197 -
Prci1g1604 628 Pfam TIR domain 16 179 IPR000157 GO:0007165
Prci1g1604 628 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Prci1g1604 628 PRINTS Disease resistance protein signature 217 232 - -
Prci1g1604 628 PRINTS Disease resistance protein signature 387 401 - -
Prci1g1604 628 PRINTS Disease resistance protein signature 294 308 - -
Prci1g1604 628 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Prci1g1604 628 Pfam NB-ARC domain 203 432 IPR002182 GO:0043531
Prci1g1604 628 SMART till_3 15 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1604 Prci-Chr1 35756572 35767157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1604 16 617 WRKY Transcription Factor Family AT4G12020 30.894 1.52e-65 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1604 - - pcin:129310467 1257.66