Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1595 ATGGAGCAACAAGCAGGATCTTCTTCCATCACTTACAAATGGACTTATGACGTCTTCATTAGTTTCCACGGCGAAGATACTCGCTTAGGTTTCATTGGTCATCTCCGCGAAGCTCTGCGTCAAAGAGGCATTCATGTCTTTAAAGATGATGAAGGAATCAGGACAGGAGAAGGAATCACAGCAGCACTTTTCAAAGCCATAGGAGAATCAAGAGTAGCAATCATAGTTTTCTCCAAAAAATATGCAAACTCGACCTTTTGCTTGGAAGAACTCTCAAAGATTCTGGAGTGCTTCAAGGAGGAAGGTCGGCTGATATATCCAGTCTTTTACTATGTGGATCCATCAGAGCTTCGACGTCCAAGAAGAAGCTATGCAAAAGCATTGGTGAGACTGGAGGAACGATTCAAAGACAATAAAGAGAAGGTGCAAAAATGGAGGTTGGCTTTGTCCCTAGCGGCTGAATTGAAAGGCTGTCATCTCAAACCCAAGATTGCCAATGAACAAGAGCACATTGCTGGGATTGTTAGTGAAGTCTCTAATAGGATTAATCGTAATAAGCCTTTATCTATTACAGATTATCCAGTTGGACTTGTGTCCCAAGCGAAGGAATTAATCTCATGTTTAAAACTTGAGTCTACTAAGGAAACTAAAATGGTTGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACCATTGCAAGAGCTGTATATAATTTGATTGGTGATCTTTTTGAAGGTGCATGTTTTCTTTCTAATGTAAGGAAAAGGTCTAAAAATATTGGCTTGTCACATCTGCAAGAGACACTACTCGATCAATTAGTCATGGAGAAGAATCTTAAATTGGGTGATATTCATGAAGGAATACCAATAATAAAATATAGGCTTAGCCAAAAGAAAATTCTTTTGATTCTTGATGATATTGATGAATTCGAACAGTTAAAAGCACTAGCTAAAAGCTGTGATTGGTTTGGTCTTGGAAGTAGAATTGTCATCACAACAAGGAATAAACAATTGTTAGTAAGTCATGGTATTGATAGTGAAAGTATCTATGATGTCAAGGAATTAAATTATGAAGAATCTCTTCAATTGCTAAATTGGCATGCCTTTAAAAATGAAAATGTGGATTCCAACTACTTGGAGGTTTGCAATCGTGCAATACATTATTCTTGTGGCTTTCCATTAGCTTTAGAAGTGATTGGTTCTAACTTATGTGGTAAAGGAGTCGATGAATGGAATGATGCATTGGATCAATTTAAAGCAATACCGTATAAAGGAGTTTTGGAAGCAGTTCAATTAAGCTATAATGCTTTAGAAGAATTTGAAAAAAAAAAAAATTCCTTGATTTGGTCTGTTTCTTCAATGATTAAAGGAGATTGTGTGATCATGCATGACTTGATAGAAGATATGGGTAAAGAGATTGTTCGTCATGAATCACAAGATGAACCTGGTGAACGTAGCAGGTTATGGTTCCATCGAGACATTCTTCAAGTCTTACAACATGACACAGAAACTAATAAAGTTGAGGCTATAGTTCTTGACTTACCTCAAGGTAAAGAAGTGCAATGGAGTGGCAATGCTTTCATGAAGATGAAGAAACTCAAAATGCTTGTGATCAAGAATGCACGCTTTTCTAAAGGCCCCACATATCTCCCAAATAGTTTAAGGTGGTTGGAGTGGAAGTAG 1683 0.3737 MEQQAGSSSITYKWTYDVFISFHGEDTRLGFIGHLREALRQRGIHVFKDDEGIRTGEGITAALFKAIGESRVAIIVFSKKYANSTFCLEELSKILECFKEEGRLIYPVFYYVDPSELRRPRRSYAKALVRLEERFKDNKEKVQKWRLALSLAAELKGCHLKPKIANEQEHIAGIVSEVSNRINRNKPLSITDYPVGLVSQAKELISCLKLESTKETKMVGIWGAGGIGKSTIARAVYNLIGDLFEGACFLSNVRKRSKNIGLSHLQETLLDQLVMEKNLKLGDIHEGIPIIKYRLSQKKILLILDDIDEFEQLKALAKSCDWFGLGSRIVITTRNKQLLVSHGIDSESIYDVKELNYEESLQLLNWHAFKNENVDSNYLEVCNRAIHYSCGFPLALEVIGSNLCGKGVDEWNDALDQFKAIPYKGVLEAVQLSYNALEEFEKKKNSLIWSVSSMIKGDCVIMHDLIEDMGKEIVRHESQDEPGERSRLWFHRDILQVLQHDTETNKVEAIVLDLPQGKEVQWSGNAFMKMKKLKMLVIKNARFSKGPTYLPNSLRWLEWK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1595 560 Gene3D - 354 438 IPR042197 -
Prci1g1595 560 SMART till_3 15 155 IPR000157 GO:0007165
Prci1g1595 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
Prci1g1595 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 560 IPR044974 GO:0006952
Prci1g1595 560 Coils Coil 128 148 - -
Prci1g1595 560 PRINTS Disease resistance protein signature 528 544 - -
Prci1g1595 560 PRINTS Disease resistance protein signature 389 403 - -
Prci1g1595 560 PRINTS Disease resistance protein signature 294 308 - -
Prci1g1595 560 PRINTS Disease resistance protein signature 218 233 - -
Prci1g1595 560 Pfam TIR domain 16 182 IPR000157 GO:0007165
Prci1g1595 560 Gene3D - 10 184 IPR035897 -
Prci1g1595 560 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Prci1g1595 560 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Prci1g1595 560 Gene3D - 185 346 IPR027417 -
Prci1g1595 560 Pfam NB-ARC domain 209 434 IPR002182 GO:0043531
Prci1g1595 560 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1595 Prci-Chr1 35573954 35576291 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1595 16 560 WRKY Transcription Factor Family AT4G12020 28.523 6.29e-51 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1595 - - pcin:129292935 1112.06