Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1593 ATGGCACAGCGAGTGGGATCTTCTTCCATCACTTACAAATGGACTTACGACGTTTTCCTTAGTTTCCATGGTGAAGATACTCGCTTGGGTTTCATTGGCTATCTCCGCGAAGCTCTACGCCAACGTGGAATTCATGCCTTTATCGATGATGAAGGCATCAGAACTGGTGAAGAAATCACACCTGCACTTTTCCGAGCCATACAAGAATCTAGAATAGCTATCATAGTATTCTCTGAAAACTATGCAAACTCGACCTTTTGCTTGAAAGAACTTGAAAAGATTCTAGAGTGTTTCAAAGAGGAAGGCCGGGTGATATATCCAGTCTTTTATTATGTGGATCCTTCGGAGCTTCGATGTCCGAGAGGAAGTTATGCAGAAGCATTGGCAAAATTGGAGGAACGATTCAAAGACAACAAGGATCAGAAGGTGGAAAAATGGAGGTTGGCTTTGTCCCAAGCAGCTAACTTGAAAGGCTGTCATCTCAAACCCAATATTACAAACGAACAAGAAGGTATTACAGAGATCATTAGTGAAGTCTCTGCTAGGATTAATCATGATCTCTTGGATGTTACTAGTTATCCAGTTGGACTTGTGCCTCGCGTTAAAGAAGTGGTCACACTTTTAGAGCTTCGGTCTATCGAGGAAACTAAAATGATAGGGATTTGGGGGCCTGGTGGAATAGGTAAATCGACAATTGCCCGAGCTTTGTATAATGGGATAGCTGTTCATTTTGAAGGCTTATGCTTTCTTTCTAATGTAAGAAAAATGTCCCAAAAGAGAAATGGTCTACCACATCTTCAAGAGACATTACTCCGTAAATTAGTTATGGAGAAGGATCTTAAACTGGGTGATTTTCATGAAGGAATACCAATAATAAAACGTAGGCTTGGTCGGAAGAAAATTCTTTTGATTCTTGATGATGTTGATGAATTGGTACAATTAGAAGCACTAGCTGGGAGTTGTGATTGGTTTGGTTTGGGAAGTAGAGTTATCATCACGACAAGGAATAAACAATTGTTAGTAAGTCATACTCATGTTAAATGCATTTATGAAGTTAGAAAATTAAATAAAGAGGAATCTCTTCAATTGCTTAGTTGGCATGCCTTTAAAAAAGAGAATGTGGAGTCTGACTTCATAGAGGTTTCCAATCATGCAATACTTTATTCTTGTGGCTTCCCATTAGCTTTAGAAGTTATTGGCTCTGATTTATGTGGTAAAGGAGTTGATCAATGGAGTGTTGCCTTGGATCAATTTAAAGCAATACCGCATGGAAAAGTTTTGAAAGTTGTCCAATTAAGCTATGATGCTTTAGGAGAATTCGAGAAAAAAGTTTTCCTTGACTTGGCTTGTTTCTTCAATGGTGAGAAATTGGGCGATGTTAAGTGTCGGTTGCTATACCTTCATGAAATCCCACCGGAAAATGCTATCAACGTGCTCATGGATAAATCCCTCATAAAGATTGAAGGAGATTGTGTGATAATGCATGACTTAATGGAAGATATGGGTAAAGAGATTGTTCGTCGAGAATCACAAGATGAGCCTGGTGAACGTAGCAGGTTATGGTTCTATCGAGACATTCTTCAAGTCTTGCAACATGACATAGGAACTAATAAAGTAAAGGCCATAGTTCTAGACTTACCTCAAGGTAATGAAGTACATTGGAGTGGAGAGGCATTCGTGAAGATGAAGAATCTCAAAATGCTTGTGATAAAGAATGCATGCTTTCCTAAAGGCCCCATATATCTCCCAAATAGTTTAAGGTGGTTGGAGTGGGAGAAGTACCCCTTTAGATTTTTACCACTTGATTTTTGTCCAATAGAACTTGTCTACCTCAACTTGTCCTACAGTTATGTTGACTTGCTCCAGTTGCCATTTGATAAGAAGTTCGAGAGTTTAAAGTACATGAATTTTAAAAGTTGTAAGTCCTTACAAGAAATACCAGACTTATCAAGAGCTTTTAATTTAATAGAGTTGTGTCTTGATGATTGTACAAGCCTAACTAAAATTCATGATTCAGTTGGAAGTTTAAGTAAACTTAGCAAATTGAGTGCTATGCGATGCAAAAACTTGAAAGTTCTACCACTTGAGCTTAGCATGGAATCTCTTGAACATCTCAACCTGTTAGGATGTTCAAGTCTACAATATTTCCCAAAAATATTGGTGAAGATGACAAAGATGAGAAAACTTGACTTGGATAGGACAGCCATAGTGGAATTGCCATCTTCAATTAGCAAACTCGTTGGGCTTGAAATTTTAAACATGGAGGAGTGTCATCATCTTAAGCAACTACCAGCTAGCATTTTCATGCTGCCAAAGCTCTGGTTTCTTTGCACAAGTCTTTGTCATGGGATGAGCGATTTGAAGATATGTGAAGATAGAGAAGAAGCAAGCATAGACAGCTACAGGAATGGGTCTTCAAAAATGGAATATTTTTATTTTTCAAATTGCAATTTGACAAATGAGTTTCTTGCACTATGTCTTTCTTGCTTCCCAAATTTGATACAGTTAGACCTAAGTTGTGGAAAATTCACAACTCTTCCTGCATGCATTGAAGAATGTTGCAACATGACAAGTCTTATCCTGGATAATTGCAAGCAGCTTCAATATATATTTGGGATGCCGCCAAACCTAAAAAAATTTAGCGCCATAAATTGCAAATCACTGACTATGATTTCTAAAGGCAGAGTATTGGATAAGGTACTCTTCACCAAGGAAGGGAAATTAAACTATGTTTTTCCAGAAAAAGAGTTCCCAGAAGACTTGATGCTCAACAAAGTTAGCAGTTCCCCTCTTTCTTTTTCGATTGGTGAAAAGTTCTCAATGATTCTGATATGGATTATGATAATAAACCAGCCGGAAAGACCACCCATAAACAACACTGTTGACCTTGATATCTCCGTGCGGATAGATGGTGTTAGCCATAAAGTCCTTTCTGAACAGTGGTTCTCATCATTTACAGTTGATCATTTATATATATTCGATCTATTCAGCATTATTAACAAGGCTGAACTCGAACTCTCCAAATCATTCAAGTGGAATGGCCGCAATCATGTCGAGATATTTGTCAAGAATAATATTCAAGATACAGAAATTCATTTAGGAACTAATGTAGGCAAACAAGGCATGAAGCTTGAAAATAACTTGCAACCAGTATGGGGACATGATGTATTTCTGAGTTTTCAAGCCAGCGATCATGATTCCTACTTTTTCAAGAACAAGTTGTACGGTGCTCTGTGTCAGAACAACATTAAGGCTTTCAATGCTAAATTCAGGAGGGAGGAAGGTATTCTCCCAACTGTGGTCAAAGCAATTGAGGAGTCAAGGATTTCAATTATTGTATTCTCTAAATCCTATGCTCATTGCAAATGGTGTCTTGACGCGCTTGCCATGATCATTGATTGTATGAAGACAAAGGGCAAATTGGTTTTTTCAATTTTCTACGATGTATACCCCTTAGAAGTAAGACATCAATCGGGAAGTTTTGCAGTAGCAATGGCGGAGCATGCAGAATATTTCAAGAATGACATGGAAAAGGTGCAGAGGTGGGAGTTCGCTTTGTCTAAAGCAACTTGCATGCGTCGTTGGAGCCTTGGAAAATGGTCGGAGGACGAAGACATTCCACGCATTGTTGAAGAAGTTTCTCGTCGCCTTCTTGCAGAACATTTAACAAAATCAGTAGAGTCAATTGGGAGCACTATGGGTGATCAAGGACCGAGACATGATGTATTGATCCTGAGCTTTAAAGAAGCCTGCAGAGATTCCTACATTTTCTCGAGACGTCTAGATAATGCTTTATGTATGAACGATATTAATGCTTTCAACTATGTTGGGAGCTCTGGATGGAATGCAGATTTATGCCCAACTATGGCCAAAGCAATTGAGGAGTCAAGGATTTCAATTATTGTATTCTCTGAATCCTATGCTCATTGCACATGGTGTCTGGACGTGCTTGCCATGATCATTGATTGTATGAAGAAAAAGGGCAAATTGGTTTTCCCAATTTTCTGTGGTATAGACCCTTCAGATGTAAGATATCAATTGGGAAGTTTCGGAATAGCAATGGCGGAGCATTCCAAGAATGACACGGAAAAGGCGGAAAGGTGGAAGTCGGCCTTGCGTGAAGCAGCTTGCATGAGTGGTTGGAGCATAGAAAAGTGGATCCAAAACTTTTCTGAAGTTATCCCACACATTGTTGAAGCTGTTTCTTGGCGCCTTCGTTTGGAACATTTAACAAAACCAATAGAGCCAATTGGAAACACTCTGGGTCATGGAGAACAACCACAAGATAGAGAAGAGCTCAAAGATGATACGTACCGGAATTTATATTCAATAAAACCCTCAGAGTTAATCGAGAGAATCATGAGTCATCATGAAGGGCCAAGACATGATGTATTGATCCTGAGTTTTGGAGATACCTGCAGTGACATTTTCGCGGACGATGTATATAATGCTTTATATGAGAACAATATTAATGCTTTTAAAGTTGTTGTGAGCATTAAATGGAATGAAGATTCGGACCCAACATCTCTTAGAGCAATTGAAGAGTCAAGGATTTTAATTATTGTATTCTCTAATGAATTCTTCACATATTCTCCGTCAAGAGACGACACACTTGTCATGATCCTTGATTGTATGAAAACAAAGAGCAAATTGGTTTTGCCCATTTTTTACGATGTAGACCTTTCGGATGCAAGACTTGAAACAAGCAGATGGAAATCAGAAATGGAAAAGCGTAGAGGCAAATTTTTGGGTTACACCAACGAGGAGAAGTTGAAGTTGAAGTCGGCTTGTTTAAAGCAGCTCGCGGGCCTGGTTGGAGATTAG 4824 0.3885 MAQRVGSSSITYKWTYDVFLSFHGEDTRLGFIGYLREALRQRGIHAFIDDEGIRTGEEITPALFRAIQESRIAIIVFSENYANSTFCLKELEKILECFKEEGRVIYPVFYYVDPSELRCPRGSYAEALAKLEERFKDNKDQKVEKWRLALSQAANLKGCHLKPNITNEQEGITEIISEVSARINHDLLDVTSYPVGLVPRVKEVVTLLELRSIEETKMIGIWGPGGIGKSTIARALYNGIAVHFEGLCFLSNVRKMSQKRNGLPHLQETLLRKLVMEKDLKLGDFHEGIPIIKRRLGRKKILLILDDVDELVQLEALAGSCDWFGLGSRVIITTRNKQLLVSHTHVKCIYEVRKLNKEESLQLLSWHAFKKENVESDFIEVSNHAILYSCGFPLALEVIGSDLCGKGVDQWSVALDQFKAIPHGKVLKVVQLSYDALGEFEKKVFLDLACFFNGEKLGDVKCRLLYLHEIPPENAINVLMDKSLIKIEGDCVIMHDLMEDMGKEIVRRESQDEPGERSRLWFYRDILQVLQHDIGTNKVKAIVLDLPQGNEVHWSGEAFVKMKNLKMLVIKNACFPKGPIYLPNSLRWLEWEKYPFRFLPLDFCPIELVYLNLSYSYVDLLQLPFDKKFESLKYMNFKSCKSLQEIPDLSRAFNLIELCLDDCTSLTKIHDSVGSLSKLSKLSAMRCKNLKVLPLELSMESLEHLNLLGCSSLQYFPKILVKMTKMRKLDLDRTAIVELPSSISKLVGLEILNMEECHHLKQLPASIFMLPKLWFLCTSLCHGMSDLKICEDREEASIDSYRNGSSKMEYFYFSNCNLTNEFLALCLSCFPNLIQLDLSCGKFTTLPACIEECCNMTSLILDNCKQLQYIFGMPPNLKKFSAINCKSLTMISKGRVLDKVLFTKEGKLNYVFPEKEFPEDLMLNKVSSSPLSFSIGEKFSMILIWIMIINQPERPPINNTVDLDISVRIDGVSHKVLSEQWFSSFTVDHLYIFDLFSIINKAELELSKSFKWNGRNHVEIFVKNNIQDTEIHLGTNVGKQGMKLENNLQPVWGHDVFLSFQASDHDSYFFKNKLYGALCQNNIKAFNAKFRREEGILPTVVKAIEESRISIIVFSKSYAHCKWCLDALAMIIDCMKTKGKLVFSIFYDVYPLEVRHQSGSFAVAMAEHAEYFKNDMEKVQRWEFALSKATCMRRWSLGKWSEDEDIPRIVEEVSRRLLAEHLTKSVESIGSTMGDQGPRHDVLILSFKEACRDSYIFSRRLDNALCMNDINAFNYVGSSGWNADLCPTMAKAIEESRISIIVFSESYAHCTWCLDVLAMIIDCMKKKGKLVFPIFCGIDPSDVRYQLGSFGIAMAEHSKNDTEKAERWKSALREAACMSGWSIEKWIQNFSEVIPHIVEAVSWRLRLEHLTKPIEPIGNTLGHGEQPQDREELKDDTYRNLYSIKPSELIERIMSHHEGPRHDVLILSFGDTCSDIFADDVYNALYENNINAFKVVVSIKWNEDSDPTSLRAIEESRILIIVFSNEFFTYSPSRDDTLVMILDCMKTKSKLVLPIFYDVDLSDARLETSRWKSEMEKRRGKFLGYTNEEKLKLKSACLKQLAGLVGD 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1593 1607 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Prci1g1593 1607 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Prci1g1593 1607 Gene3D - 1455 1607 IPR035897 -
Prci1g1593 1607 SUPERFAMILY Toll/Interleukin receptor TIR domain 1050 1189 IPR035897 -
Prci1g1593 1607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Prci1g1593 1607 PRINTS Disease resistance protein signature 697 713 - -
Prci1g1593 1607 PRINTS Disease resistance protein signature 295 309 - -
Prci1g1593 1607 PRINTS Disease resistance protein signature 218 233 - -
Prci1g1593 1607 PRINTS Disease resistance protein signature 389 403 - -
Prci1g1593 1607 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1284 1412 IPR044974 GO:0006952
Prci1g1593 1607 Pfam TIR domain 1287 1406 IPR000157 GO:0007165
Prci1g1593 1607 Pfam TIR domain 1475 1576 IPR000157 GO:0007165
Prci1g1593 1607 Pfam TIR domain 16 180 IPR000157 GO:0007165
Prci1g1593 1607 Pfam TIR domain 1054 1226 IPR000157 GO:0007165
Prci1g1593 1607 Gene3D - 10 190 IPR035897 -
Prci1g1593 1607 Gene3D - 1237 1412 IPR035897 -
Prci1g1593 1607 Gene3D - 191 349 IPR027417 -
Prci1g1593 1607 ProSiteProfiles TIR domain profile. 1460 1605 IPR000157 GO:0007165
Prci1g1593 1607 ProSiteProfiles TIR domain profile. 1052 1221 IPR000157 GO:0007165
Prci1g1593 1607 ProSiteProfiles TIR domain profile. 1238 1405 IPR000157 GO:0007165
Prci1g1593 1607 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Prci1g1593 1607 SUPERFAMILY L domain-like 540 894 - -
Prci1g1593 1607 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Prci1g1593 1607 SUPERFAMILY Toll/Interleukin receptor TIR domain 1251 1381 IPR035897 -
Prci1g1593 1607 Gene3D - 1051 1223 IPR035897 -
Prci1g1593 1607 Pfam NB-ARC domain 214 429 IPR002182 GO:0043531
Prci1g1593 1607 SMART till_3 1461 1604 IPR000157 GO:0007165
Prci1g1593 1607 SMART till_3 1239 1378 IPR000157 GO:0007165
Prci1g1593 1607 SMART till_3 15 156 IPR000157 GO:0007165
Prci1g1593 1607 SMART till_3 1053 1192 IPR000157 GO:0007165
Prci1g1593 1607 Gene3D - 354 438 IPR042197 -
Prci1g1593 1607 Gene3D Ribonuclease Inhibitor 520 691 IPR032675 -
Prci1g1593 1607 SUPERFAMILY Toll/Interleukin receptor TIR domain 1461 1572 IPR035897 -
Prci1g1593 1607 Gene3D Ribonuclease Inhibitor 696 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1593 Prci-Chr1 35436337 35516387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1593 16 781 WRKY Transcription Factor Family AT4G12020 32.656 6.76e-84 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1593 - - pcin:129318502 3213.32