Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1583 ATGGAGGTTGGCTTTGTCCCAAGCAGCAGATTTCGAAGGCTGTCATCTCAAACCCAAAAGTTCGAGAGTTTAAGAGAGATGAATTTTAAAAGTTGTAAATTCTTACGAGGAATACCAGATTTATCAGGAGCTTCTAGTTTAACAGAATTGTGTTTTGATGATTGTACAAACTTATTTGAAATTCATGATTCAGTTGGATATTTAAACAAACTTGAAAGATTGAGTGCCATGCGATGCAAAAACTTGAAGATTTTGCCACGTGGCCTTAGCATGGCATCACTTGAACATCTCAACTTGTATGGATGTTCAAGTGTACAATATTTCCCCAAAATATTGGTGAAGATGACAAAGATGAGAACACTTGAATTGGATAGGACGGCCATTGTAGAGTTACCATCTTCAATTTGCATTCTCATTGGGCTCGGAATGTTAAACATGGAGGAGTGTCATCATCTTAAGCAACTACCAGCTAGCATTTTCATGCTGCCAAACCTTTGGTCACTAAGCACAAATTTTTGTAAAGGGATGAGATATTTGAAGATATGTGAAGATGGAGAAGAAGCAAGTATAGACTGCAGGAATGAGTCTTCAAAAATGGAATATTTTTATTTTTCAAATTGCAACTTGTCAAATGACTCTTGCACTATGTCTTTCTTACTTCCTAAATTTGATACAGTTGGATCAAGTGGTGGAGAATTCACAACTCTTCCTGCATGCATGGAAGAATGTTACTGTATGAAATATCTTTTCGTTGATAATTGCAAGCGGCTTCAACATATTTTAGGGATGCCGCCAAGCCTAGAAAAATTTAGCGCCATAAATTGCGCATTATTGACTACGATTTCTAAAGGCAGAGTATTGGATCAGGAAGTCTACCATAAACAAGGAAAACTAAAATATGTTTTTCCAGAAAAAGAGTTCCCAGAATTTCTCGACACAGTTAGCCACAATCCCCCTCTGTCATTTTGGATTCGTGAAGAGTTCCCAATGATTCTGATATGTATTCTTGTTAAAGACCTCCTAGATTCTCTCTTCTACCTTAATATCTCCGTGTTGATAAATGGTGATAGCCAAGAATTTCCTTCTGATCAGTGGTTCTCAACATCAAAGGTTAATCATTTATATATGTTTGATCTATACAGCATTATTAGCAAGGCTGATCTGAAACTCTCCCAATCTAAGAGGAATGCCTGGAATTATGTGGAGATTTTCATCAATAATTCTACACCCGGACTGGAACTTGTTCCAAAAATTTATTTAGGGGCTGCAGTATGCAAACAAGACATTAAGTTTAACAATATCAGCTTTTTGAGACCAGGATCAAAATATGATGTATTTATGAGTGTTGATCAAGACAGCCATTTCGACTCTTTCACGGGCATGTTATGTAGAGCTTTGTATGGGAGCAAGATTAATGTTTTCAAACGAGTTAAAGACTTGGGATGGGTAGAAGATATTTGCCCAACAGTGGTCCAGGCAATTGAGGAGTCAAGGATTTCAATTATCGTATTCTCTGAATTCTATGCTTATTACACGTGGTGTCTTGACACACTTGCTATGATCATTGATTGTATGAAAACAAAGGGCAAATTGGTTTTCCCAATTTTCTACCATGTAGACCCTTCAGATGTAAGACATCAATCAGGAAGTTTTGGATTAGCAATGGACGATCATGAAAGCATGGAAAAGGGGCAAAAGTGGAAGTTGGCTTTGTCTGAAGCAGCTCACTTGCGTGGTTGGAGCATAACAGCAGAAATGGACATAGATGGCATTATCCCACGCATTGTTGAAGTTGTTTCTCGTCACCTTCGCCTAGAACATTTAACAAAATCAGTAGAGTCAACTGGGAATACTATGGGTCATCGAGAACAACCAGGAGATAGATTAGAGCTCGAAGATGGTATTTATTGGGATTTAAATTCAATGAAATCCACAGACTTAACAGAGAGCATCAGGGGTCATCAAGGACCGGGACATGATGTATTGATCCTGAGTTTTGAAGAAGCCTGTATCAATTCTGACATTTTCGTGGATGATCTATATAATGCTTTATGTGAGAACAATATCAATGCTTTTAAAGATGTTGGGAGCTTTGGATGGAGTGAAGATTTGGACCCAACAGCTCTTAGAGCAATTGAAGAGTCAAGGATTTCAATTATTACCCTTCGATGGTAG 2175 0.3784 MEVGFVPSSRFRRLSSQTQKFESLREMNFKSCKFLRGIPDLSGASSLTELCFDDCTNLFEIHDSVGYLNKLERLSAMRCKNLKILPRGLSMASLEHLNLYGCSSVQYFPKILVKMTKMRTLELDRTAIVELPSSICILIGLGMLNMEECHHLKQLPASIFMLPNLWSLSTNFCKGMRYLKICEDGEEASIDCRNESSKMEYFYFSNCNLSNDSCTMSFLLPKFDTVGSSGGEFTTLPACMEECYCMKYLFVDNCKRLQHILGMPPSLEKFSAINCALLTTISKGRVLDQEVYHKQGKLKYVFPEKEFPEFLDTVSHNPPLSFWIREEFPMILICILVKDLLDSLFYLNISVLINGDSQEFPSDQWFSTSKVNHLYMFDLYSIISKADLKLSQSKRNAWNYVEIFINNSTPGLELVPKIYLGAAVCKQDIKFNNISFLRPGSKYDVFMSVDQDSHFDSFTGMLCRALYGSKINVFKRVKDLGWVEDICPTVVQAIEESRISIIVFSEFYAYYTWCLDTLAMIIDCMKTKGKLVFPIFYHVDPSDVRHQSGSFGLAMDDHESMEKGQKWKLALSEAAHLRGWSITAEMDIDGIIPRIVEVVSRHLRLEHLTKSVESTGNTMGHREQPGDRLELEDGIYWDLNSMKSTDLTESIRGHQGPGHDVLILSFEEACINSDIFVDDLYNALCENNINAFKDVGSFGWSEDLDPTALRAIEESRISIITLRW 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1583 724 SUPERFAMILY Toll/Interleukin receptor TIR domain 436 580 IPR035897 -
Prci1g1583 724 Gene3D Ribonuclease Inhibitor 6 90 IPR032675 -
Prci1g1583 724 Gene3D Ribonuclease Inhibitor 91 288 IPR032675 -
Prci1g1583 724 Pfam TIR domain 442 581 IPR000157 GO:0007165
Prci1g1583 724 SMART till_3 442 577 IPR000157 GO:0007165
Prci1g1583 724 PANTHER TMV RESISTANCE PROTEIN N-LIKE 663 722 - -
Prci1g1583 724 ProSiteProfiles TIR domain profile. 441 603 IPR000157 GO:0007165
Prci1g1583 724 SUPERFAMILY L domain-like 13 283 - -
Prci1g1583 724 Gene3D - 439 610 IPR035897 -
Prci1g1583 724 Gene3D - 664 723 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1583 Prci-Chr1 35140235 35147456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1583 13 173 WRKY Transcription Factor Family AT4G12020 35.404 1.36e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1583 - - pcin:129313132 1469.52