Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1582 ATGGAGGTTGGCTTTGTCCCAAGCAGCAGATTTCGAAGGCTGTCATCTCAAACCCAAAAGTTCGAGAGTTTAAGAGAGATGAATTTTAAAAGTTGTAAATTCTTACGAGGAATACCAGATTTATCAGGAGCTTCTAGTTTAACAGAATTGTGTTTTGATGATTGTACAAACTTATTTGAAATTCATGATTCAGTTGGATATTTAAACAAACTTGAAAGATTGAGTGCCATGCGATGCAAAAACTTGAAGATTTTGCCACGTGGCCTTAGCATGGCATCACTTGAACATCTCAACTTGTATGGATGTTCAAGTGTACAATATTTCCCCAAAATATTGGTGAAGATGACAAAGATGAGAACACTTGAATTGGATAGGACGGCCATTGTAGAGTTACCATCTTCAATTTGCATTCTCATTGGGCTCGGAATGTTAAACATGGAGGAGTGTCATCATCTTAAGCAACTACCAGCTAGCATTTTCATGCTGCCAAACCTTTGGTCACTAAGCACAAATTTTTGTAAAGGGATGAGATATTTGAAGATATGTGAAGATGGAGAAGAAGCAAGTATAGACTGCAGGAATGAGTCTTCAAAAATGGAATATTTTTATTTTTCAAATTGCAACTTGTCAAATGACTCTTGCACTATGTCTTTCTTACTTCCTAAATTTGATACAGTTGGATCAAGTGGTGGAGAATTCACAACTCTTCCTGCATGCATGGAAGAATGTTACTGTATGAAATATCTTTTCGTTGATAATTGCAAGCGGCTTCAACATATTTTAGGGATGCCGCCAAGCCTAGAAAAATTTAGCGCCATAAATTGCGCATTATTGACTACGATTTCTAAAGGCAGAGTATTGGATCAGGAAGTCTACCATAAACAAGGAAAACTAAAATATGTTTTTCCAGAAAAAGAGTTCCCAGAATTTCTCGACACAGTTAGCCACAATCCCCCTCTGTCATTTTGGATTCGTGAAGAGTTCCCAATGATTCTGATATGTATTCTTGTTAAAGACCTCCTAGATTCTCTCTTCTACCTTAATATCTCCGTGTTGATAAATGGTGATAGCCAAGAATTTCCTTCTGATCAGTGGTTCTCAACATCAAAGGTTAATCATTTATATATGTTTGATCTATACAGCATTATTAGCAAGGCTGATCTGAAACTCTCCCAATCTAAGAGGAATGCCTGGAATTATGTGGAGATTTTCATCAATAATTCTACACCCGGACTGGAACTTGTTCCAAAAATTTATTTAGGGGCTGCAGTATGCAAACAAGACATTAAGTTTAACAATATCAGCTTTTTGAGACCAGGATCAAAATATGATGTATTTATGAGTGTTGATCAAGACAGCCATTTCGACTCTTTCACGGGCATGTTATGTAGAGCTTTGTATGGGAGCAAGATTAATGTTTTCAAACGAGTTAAAGACTTGGGATGGGTAGAAGATATTTGCCCAACAGTGGTCCAGGCAATTGAGGAGTCAAGGATTTCAATTATCGTATTCTCTGAATTCTATGCTTATTACACGTGGTGTCTTGACACACTTGCTATGATCATTGATTGTATGAAAACAAAGGGCAAATTGGTTTTCCCAATTTTCTACCATGTAGACCCTTCAGATGTAAGACATCAATCAGGAAGTTTTGGATTAGCAATGGACGATCATGAAAGCATGGAAAAGGGGCAAAAGTGGAAGTTGGCTTTGTCTGAAGCAGCTCACTTGCGTGGTTGGAGCATAACAGCAGAAATGGACATAGATGGCATTATCCCACGCATTGTTGAAGTTGTTTCTCGTCACCTTCGCCTAGAACATTTAACAAAATCAGTAGAGTCAACTGGGAATACTATGGGTCATCGAGAACAACCAGGAGATAGATTAGAGCTCGAAGATGGTATTTATTGGGATTTAAATTCAATGAAATCCACAGACTTAACAGAGAGCATCAGGGGTCATCAAGGACCGGGACATGATGTATTGATCCTGAGTTTTGAAGAAGCCTGTATCAATTCTGACATTTTCGTGGATGATCTATATAATGCTTTATGTGAGAACAATATCAATGCTTTTAAAGATGTTGGGAGCTTTGGATGGAGTGAAGATTTGGACCCAACAGCTCTTAGAGCAATTGAAGAGTCAAGGATTTCAATTATTGTATTCTCTGAATTCTATGCATATTCTGTATGGTGTCTTGACGCACTTGTTATGATCCTCGACTGTATGAAAACAAAAGGCAAATTGGTTTTTCCCGTTTTCTACAATGTAGACCCTTCGATGGTAGGACGTCAAACAGGAAGATTTGAATTGGCAATGGCCGAGCATGAAGATAGATTAAAGGATAACATGGAAAAGGTGAAGAAGTGGAAGTTGGCTTTGTCTGAAGCAGCTCAGTTGCTCAGTTGGAGCTTAGAAAAAGGGGAAGAAATTGATGTTATCCCGCATATTGTTGAAGAAGTTGCTTGTCACCTTTGTTTTGAACGTCTTTCAAAATCTACAGAATCAACTGATGAGATCATTATAGAACAACCAGAAGATAGGGAAGAGCTTGAAGATGACGACCCTTGTCAGGATTCAAGTTCAATGAAATATATAGGGTTGACAAAGAGCATTGTGAGTCAACAAGCGGAGCAACCACATCATGGTAAGGGTTTCCCTGATGATGGTCAATTGCAAGGCAAGAACTAA 2691 0.382 MEVGFVPSSRFRRLSSQTQKFESLREMNFKSCKFLRGIPDLSGASSLTELCFDDCTNLFEIHDSVGYLNKLERLSAMRCKNLKILPRGLSMASLEHLNLYGCSSVQYFPKILVKMTKMRTLELDRTAIVELPSSICILIGLGMLNMEECHHLKQLPASIFMLPNLWSLSTNFCKGMRYLKICEDGEEASIDCRNESSKMEYFYFSNCNLSNDSCTMSFLLPKFDTVGSSGGEFTTLPACMEECYCMKYLFVDNCKRLQHILGMPPSLEKFSAINCALLTTISKGRVLDQEVYHKQGKLKYVFPEKEFPEFLDTVSHNPPLSFWIREEFPMILICILVKDLLDSLFYLNISVLINGDSQEFPSDQWFSTSKVNHLYMFDLYSIISKADLKLSQSKRNAWNYVEIFINNSTPGLELVPKIYLGAAVCKQDIKFNNISFLRPGSKYDVFMSVDQDSHFDSFTGMLCRALYGSKINVFKRVKDLGWVEDICPTVVQAIEESRISIIVFSEFYAYYTWCLDTLAMIIDCMKTKGKLVFPIFYHVDPSDVRHQSGSFGLAMDDHESMEKGQKWKLALSEAAHLRGWSITAEMDIDGIIPRIVEVVSRHLRLEHLTKSVESTGNTMGHREQPGDRLELEDGIYWDLNSMKSTDLTESIRGHQGPGHDVLILSFEEACINSDIFVDDLYNALCENNINAFKDVGSFGWSEDLDPTALRAIEESRISIIVFSEFYAYSVWCLDALVMILDCMKTKGKLVFPVFYNVDPSMVGRQTGRFELAMAEHEDRLKDNMEKVKKWKLALSEAAQLLSWSLEKGEEIDVIPHIVEEVACHLCFERLSKSTESTDEIIIEQPEDREELEDDDPCQDSSSMKYIGLTKSIVSQQAEQPHHGKGFPDDGQLQGKN 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1582 896 SUPERFAMILY Toll/Interleukin receptor TIR domain 436 580 IPR035897 -
Prci1g1582 896 Coils Coil 773 793 - -
Prci1g1582 896 MobiDBLite consensus disorder prediction 862 878 - -
Prci1g1582 896 Pfam TIR domain 442 581 IPR000157 GO:0007165
Prci1g1582 896 Pfam TIR domain 674 837 IPR000157 GO:0007165
Prci1g1582 896 ProSiteProfiles TIR domain profile. 441 603 IPR000157 GO:0007165
Prci1g1582 896 MobiDBLite consensus disorder prediction 842 856 - -
Prci1g1582 896 Gene3D Ribonuclease Inhibitor 6 295 IPR032675 -
Prci1g1582 896 Gene3D - 659 831 IPR035897 -
Prci1g1582 896 Gene3D - 439 610 IPR035897 -
Prci1g1582 896 PANTHER TMV RESISTANCE PROTEIN N-LIKE 441 584 - -
Prci1g1582 896 SMART till_3 442 577 IPR000157 GO:0007165
Prci1g1582 896 SMART till_3 658 800 IPR000157 GO:0007165
Prci1g1582 896 SUPERFAMILY L domain-like 13 283 - -
Prci1g1582 896 ProSiteProfiles TIR domain profile. 657 798 IPR000157 GO:0007165
Prci1g1582 896 SUPERFAMILY Toll/Interleukin receptor TIR domain 673 801 IPR035897 -
Prci1g1582 896 MobiDBLite consensus disorder prediction 837 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1582 Prci-Chr1 35140235 35151370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1582 631 826 WRKY Transcription Factor Family AT4G12020 24.490 4.23e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1582 - - pcin:129313132 1812.73