Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1577 ATGGCTCAGCAAGCTGCGTCCTCTTCTCTCGCCTACAAATGGACGTACGACGTGTTCCTTAGCTTTCGAGGTGAGGATACTCGCTTGAATTTCATCGGCCATCTATACGATTCTCTCCGTCAAAGTGGAATCCATTCCTTCATCGATGATGAATCCCTTTGGGCAGGGGAAGAAATCAAACCCTCTCTTTTGAGAGCCATACAAGAATCCAGGATTGCTATCATAGTCTTCTCCGAAAACTATGCATCCTCGACGTTCTGTCTGGACGAACTTGCCGAGATTATGGATTGCTTCAAAGAAGAAGGTCGGTTGGTGTATCCGGTGTTTTATTACGTGGATCCTTCAGAAGTGAGGCATCAAGCAGGGAGCTATGGAGAAGCACTGGCTCACTTGCAGAAAAGATTGGAAAACACAGAGCAGAAGCTGCAAAAGTGGAGGTTGGCTTTGTCTGAAGCAGCTAACTTGTCTGGTTGGCATCTCAAACCTGGGATTGCAAAAGAACAAGAGTATATTAAAAGGATCACAAGTGAAGTTTCTGCAAGGATTAATCGTATACCTTTGCATGTTACTGATTATTCAATTGGACTCGAGTCTCGAGTACGAGAAGTTATCTCACTTCTAGATATTTGGTCTGACGAGGAAGTCAAAATGGTAGGAATTGGTGGAATTGGTGGAATAGGTAAATCAACAATTGCAAGAGGTGTGTGTAACTCTGTGGCTGATCATTTTGAAGATTTATGTTTTCTTTCTAATGTTAGAGAACTCTCTAGTAAGCAAGGCTTGTCTCATCTCCAAGGGAAATTACTTTACGAAATAATCAAGGAGAAAAAACTCAGATTGGGTGATCTCCACAGAGGGATTTCAATAATAAAACACAGGCTCCAACGAAAGAAGATTCTTTTAATCCTTGATGATGTTGATAAATTGGAACAGTTACGAGCACTGGCTGGAACATGTGATTGGTTTGGCCGTGGAAGTAGGATTATCATTACGACAAGGAATAAACAATTGTTAGCTGGTCATGGGGTTGAAAGAATTTATAATGTAAAGGAGTTAAGTTATGAGGAATCTCTTCAGTTAATTAGCTGGAATGCCTTTAAAAAGAGAAATCTGAATTCTGAGTACGTAGATGTTTTAAATCGGGCAGTGCTTTACTCTTGTGGCCTTCCATTAGTTTTGGAAGTGATTGGTTCTAACTTGTGTGGTAAAAGTATCAATGAGTGGAATTCTGGATTAGATCAATATGAAACAATACCCAATAGTGAAATTTTTGAGGTCCTCAAATTAAGCTTTGATGGTCTAGAGGAAAAGGAGAAGGAAATTTTCCTTGATTTAGCTTGTTTTCTCAAAGGTGAGAAATTAGAAGAGGTTAAGGGTATGTTGCAAAGTCTGCATGAAATCCCACCAGAATATGCTATTGGAGTGCTTGTTGACAAATCTTTAGTGAACATTCGAGAGAATCGTCTCACGATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGACGACAATCACCAAATGAGCCAGGTGAGCGTAGTAGGCTATGGTGCTTCAAGGACATTCTTCATATCTTACAAGAAAACATGGGAACGAAGAAAATTCAAGTCATGATACTAGACTTACCCCAAGATAAGGAAGTACGATGGAATGGAAAGGGATTCATGAAGATGAAGAACCTTAAGGTTCTTGTGGTAAAAAATGCATGCTTTTCTCAACGTCCCAAATATCTTCCAAATAGTTTAAGGGTGCTGGTCTGGAAAGGGTATCCTTTCAAATTTTTACCATCCGATTTTCATCCAACAAAACTTGTCTATATCAACTTGTCTGATAGTTATTGTCACTTGCTGCCATTTGTTAAGATGTTCGAGAGCTTAAGCTGCATGGATTTTAAAAATTGTAAATTTCTAAGGCAGATACCGGATCTGTCAGGAGCTTCTAATTTAAGAGAATTGTGGCTTGATGGTTGCACAAATTTAATCCAAATTCATGAGTCGGTTGGATTTTTGAATAATTTGAGAGAATTGAGTGCGATGAAATGCAAGAGCTTGAGGATTTTGCCATCTAGCTTCACATTGACATCTCTTGAATGTCTCAACTTTTTTGGCTGTTCCAGCCTTCAAAGTTTTCCACAAATACTAGACAAAATGGAAAAGATGAAAGTACTTGAATTAGGCAGAACAGCTGTACAAGAATTGCCATCATCAATTTGCAATCTTGTTGGGCTTGAAATCTTGAACATGGAGGAGTGTCATCATCTAAAGAGGCTTCCCGTTGATATTTGTATGCTGCCAAACCTTTGCGAATTAAGAGCAAATTTCTGTGTTATGATGAACAATTTTGAGATGGGCCAAGGTGGAGAACAAAGAATCTCAAACCCCAGAGGATTGTCATTGACACATGTTTGGTTCTCAAATTGCAATTTATCAAATGGTTTTCTTGCTTTTGGCCTTTCTTACTTGCCTAATTTAATACATTTAGATCTAAGTTTCAATAATTTCACAACCCTTCCAGCATGCATAGAAGATTGTCACTATTTGAATTGTCTTTTGTTGGATAATTGCAAGCTGCTTAAGTATATTGATGGGGTGCCACCAAATCTAGAAAAATTTAGTGCTACATGTTGCCCATCATTAAGCCAATTGTCCAGAAGCCTAGTATTGAAACAGGTTTTCTCTCAACAACCTGGAAGGAAAAACTTTATTTTGCCTGGAAAGACGATCCCAGAATGGTTCCACAAGTATAGCCGAGGATGTTCTCCATCCTTTTGGGTTCGTGAAGAGTTCCCACTGATTTGTCTGTGCTTTCTTATTAGAGATGACAGGAATTCCGTCGGCAACTATACATTCTCGCTATTTGTGGATGGCATAGTGATGGGGATTTCTTCAGCGTGCTTGCCGCTATCAGAGATGAAACCAAATCATTTGTATGTTTGTGATTTACAGAGCATGATTCCCAACACTAAACTCCCCCTGCCAAATAACTGGAAGCGAGTGGAAATTTCCATCAAGGACGGCTCGAACAGTGATGATGAGAACGTTTATTGTGCAGTTCATACAAACAAGAATGAAAATAATAGAAAAAATATCAGCTTTACGGACCCTAATCCTACGATGGAAATGTCTGATGCCAAAACACAACCTTGGGGAGAAACTAAGCACATCGTTTCCTGCTACTTGTTCTCACATACTGATTTTTTTCACGCTTCTCTTGTCAGGTGA 3225 0.3926 MAQQAASSSLAYKWTYDVFLSFRGEDTRLNFIGHLYDSLRQSGIHSFIDDESLWAGEEIKPSLLRAIQESRIAIIVFSENYASSTFCLDELAEIMDCFKEEGRLVYPVFYYVDPSEVRHQAGSYGEALAHLQKRLENTEQKLQKWRLALSEAANLSGWHLKPGIAKEQEYIKRITSEVSARINRIPLHVTDYSIGLESRVREVISLLDIWSDEEVKMVGIGGIGGIGKSTIARGVCNSVADHFEDLCFLSNVRELSSKQGLSHLQGKLLYEIIKEKKLRLGDLHRGISIIKHRLQRKKILLILDDVDKLEQLRALAGTCDWFGRGSRIIITTRNKQLLAGHGVERIYNVKELSYEESLQLISWNAFKKRNLNSEYVDVLNRAVLYSCGLPLVLEVIGSNLCGKSINEWNSGLDQYETIPNSEIFEVLKLSFDGLEEKEKEIFLDLACFLKGEKLEEVKGMLQSLHEIPPEYAIGVLVDKSLVNIRENRLTMHDLIEDMGKEIVRRQSPNEPGERSRLWCFKDILHILQENMGTKKIQVMILDLPQDKEVRWNGKGFMKMKNLKVLVVKNACFSQRPKYLPNSLRVLVWKGYPFKFLPSDFHPTKLVYINLSDSYCHLLPFVKMFESLSCMDFKNCKFLRQIPDLSGASNLRELWLDGCTNLIQIHESVGFLNNLRELSAMKCKSLRILPSSFTLTSLECLNFFGCSSLQSFPQILDKMEKMKVLELGRTAVQELPSSICNLVGLEILNMEECHHLKRLPVDICMLPNLCELRANFCVMMNNFEMGQGGEQRISNPRGLSLTHVWFSNCNLSNGFLAFGLSYLPNLIHLDLSFNNFTTLPACIEDCHYLNCLLLDNCKLLKYIDGVPPNLEKFSATCCPSLSQLSRSLVLKQVFSQQPGRKNFILPGKTIPEWFHKYSRGCSPSFWVREEFPLICLCFLIRDDRNSVGNYTFSLFVDGIVMGISSACLPLSEMKPNHLYVCDLQSMIPNTKLPLPNNWKRVEISIKDGSNSDDENVYCAVHTNKNENNRKNISFTDPNPTMEMSDAKTQPWGETKHIVSCYLFSHTDFFHASLVR 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1577 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 781 IPR044974 GO:0006952
Prci1g1577 1074 Gene3D Ribonuclease Inhibitor 722 893 IPR032675 -
Prci1g1577 1074 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Prci1g1577 1074 Gene3D - 186 345 IPR027417 -
Prci1g1577 1074 SUPERFAMILY L domain-like 508 886 - -
Prci1g1577 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Prci1g1577 1074 SMART till_3 15 155 IPR000157 GO:0007165
Prci1g1577 1074 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Prci1g1577 1074 Gene3D - 351 435 IPR042197 -
Prci1g1577 1074 Coils Coil 121 155 - -
Prci1g1577 1074 Gene3D Ribonuclease Inhibitor 542 721 IPR032675 -
Prci1g1577 1074 Pfam NB-ARC domain 197 416 IPR002182 GO:0043531
Prci1g1577 1074 PRINTS Disease resistance protein signature 820 836 - -
Prci1g1577 1074 PRINTS Disease resistance protein signature 293 307 - -
Prci1g1577 1074 PRINTS Disease resistance protein signature 386 400 - -
Prci1g1577 1074 PRINTS Disease resistance protein signature 217 232 - -
Prci1g1577 1074 Gene3D - 10 185 IPR035897 -
Prci1g1577 1074 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Prci1g1577 1074 SMART LRR_typ_2 822 845 IPR003591 -
Prci1g1577 1074 SMART LRR_typ_2 718 741 IPR003591 -
Prci1g1577 1074 Pfam TIR domain 16 180 IPR000157 GO:0007165
Prci1g1577 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1577 Prci-Chr1 35079654 35084082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1577 16 782 WRKY Transcription Factor Family AT4G12020 32.111 9.55e-87 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1577 - - pcin:129295352 2145.93