Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1569 ATGACAGTCAGGGGAAAGTATTTTACATTGAGTGATTTCCATAGTTCAATAGCACAACAGAAAAAGATTCTTATAATTCTTGATGATGTTGATGAATCAGAGCAATTACAAGAACTTGTTGGAAGATGTGATTGGTATGGTTGTGGAAGTAGAGAAATCATCACCGCAAGGAATATACAGTTGTTATATAGCCATGGGATTCAAACAATTTATGATGTTGAGAAATTAAAAACTTTAGAAGCTCGTGACTTGTTAAGCTGGAGTAACTTTAAGAATTACATGTTGGAGGTTGGTTACTTTGACGTTTCGAGACGTGCACTACATTATTCAAGTGGCATTCCATTTGCTTTGGAAGTGATTGGCTCCTACTTATGTGGTAAAACTATGGATGAATGGAATTCTGCATTACATGAGATGGAAAAATACCCAATAGAGACGCTTTTATGCAACAATAGGCATTTCATGAATGTTGAGGAGCAGCTCAAGGAGCTAGCCATTTTGGAAGAGAAAGAACCCCAATCTTGTTACAGAGGAAAAAGTTTGTTAAACATGCATGTGGAAGAGCAGCTCAATATAGTGTTTCCATGA 588 0.3656 MTVRGKYFTLSDFHSSIAQQKKILIILDDVDESEQLQELVGRCDWYGCGSREIITARNIQLLYSHGIQTIYDVEKLKTLEARDLLSWSNFKNYMLEVGYFDVSRRALHYSSGIPFALEVIGSYLCGKTMDEWNSALHEMEKYPIETLLCNNRHFMNVEEQLKELAILEEKEPQSCYRGKSLLNMHVEEQLNIVFP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1569 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 147 IPR027417 -
Prci1g1569 195 Gene3D - 5 69 IPR027417 -
Prci1g1569 195 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 144 IPR044974 GO:0006952
Prci1g1569 195 Gene3D - 76 166 IPR042197 -
Prci1g1569 195 Pfam NB-ARC domain 19 156 IPR002182 GO:0043531
Prci1g1569 195 PRINTS Disease resistance protein signature 17 31 - -
Prci1g1569 195 PRINTS Disease resistance protein signature 110 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1569 Prci-Chr1 34937822 34940563 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1569 21 127 WRKY Transcription Factor Family AT5G45050 32.710 5.47e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1569 - - pcin:129311787 399.053