Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1567 ATGGCACAGCGATCGCTGTCTTCTTCCATCAACTACAGATGGACTTATGATGTGTTTCTTAGTTTTCGAGGTGAAGATACCCGTTTAGGTTTTGTTGGTCATCTCTATGATTCTCTGCGTCAGAGGGGAATCCAGGCCTTCATAGATGACGAATCCATCAGGATTGGCGAAGAAATCACAGAGTCTCTTTTCAAAGCCATACAAGAATCCAGGATAGCGATCATAGTTTTCTCCGAGAACTATGCATCCTCAACTTTTTGTCTCGATGAACTAGTCCAGATTCTTCAATGCTTCGAAGAACAAGGTCGATTGGTTTATCCAGTATTTTATTATGTGGATCCTTCGGATCTGCGAAATCAAAGAGGGAGTTATGGGAAATCATTGGATCTGCTTGAGAAAAGATTCAAGGATGACAAGCAAAAGCAAAAGGTGCAAAAATGGAGGTTGGCTGTGTCCAAAGCAGCTGATTTAAAAGGCTGGCATCTCAAACCTGGGATTGCAAATGAACGAGAATGTATTACAAAGATTATTAGCGAAGTTTTTTCTAGGGTTAATCATGATCCCTTAGACATTACTCGTTATCTAGTTGGACTTGTGCCTCGAGTGAAAGAAGTGATCTCACTTTTAGAGCTTTGGTCTACTAAGAAAACTAAAATGGTAGGGATTTGGGGAGTTAGTGGAATTGGTAAATCAACAATTGTAAGAGCCTTGTGTAATTTGATAGCTAATAATTTTGAAGGAGTATGCTTCCTTTCTAATGTAAGAAAAGAGTCCCAAATGCCAAATGGTTTGGCACATCTTCAAGAGAAATTACTCCTTAAATTAGTCATGGAAAAGGATCTCAAATTGGGTGATTTTCATGAAGGAATACCAATAATAAAACGTAGGCTTTGCCAGAAGAAAATTCTTTTGATTCTTGATGATGTTGATGGATTGAAACAGTTAGAAGCACTAGCTGGAAATTGCGATTGGTTTGGTCTTGGAAGTAGAATTGTCATAACAACAAGGAATAAACAGTTGTTAGTAGCTCATGATGTTAATAGAATTTATAATGTTCGAGAATTAAATGATGAGGACTCTCTTCAATTGCTTAGTTGGTATGCCTTTAAAAAGGAGAATGTGGAGTCTGACTTCTTAAAGGTTTCCAATCGTGCAATACAATATTGTTGTGGCCTTCCATTAGCTATAGAAGTGTTGATTTCTAACTTGCGAGGTAAAGGAGTCAATGAATGGCACTGTGCATTAGATCAATGTGAAAGAAGTCAAGGAGGACCAGTTTTGGAATCCTTTAGATCAAGCTATGATGCTTTAGGAGAAATTGAGAAAAACATTTTCTTGGACTTGGCATGTTTCTTCAAAGGTGAAAATTTAAGAAAAGTCAAGGGTATGTTGCATTGTTTACATGAAATCCAACCAGACTACATTATTGGAGTCTTGATTGATAAAGCCCTCATCAACATTGAAGGAGATCGAGTGGGAATGCAAGGTTTGATAGAAGATATGGGTAAAATGATTGTTCGACAGCAATCACCTGGTGAACCTAGTGAACGAAGTAGGTTATGGTACTACCAAGATATTCTTCATGTTTTAAAACGAAACACGGGAACTAATAAAGTTGAAGTCATAATTCTAAACCTACCAGAAGGTAGTGAAGTTCAAATAAAATGGAGCAGAAAGGCATTCATGAAGATGGAGAATCTTAAAATGCTTGTGATAAAAAATGTAAGCTTTTCTAAATGCCCCAAATATCTCCCAAATGGCTTAAGGTGGTTGGAATGGAAGGGCTATCCTTTCAAGGTTTTGCCATATAATATTTGCTCCACAGAACTTGTTTATCTTGACTTGTCTTACAGTAATTTTGAATCACTCCAACCATTTACAAAGAAGTTCCACAGTTTAAGTTGTATGAACTTTAGAAATTGCAAATTTCTACAACAAACACCAAATTTTTCTGGAGTTTCTAATTTAAGAGAGTTGTGGCTTGATGATTGTACAAATTTAATTGAAATACATCATTCAGTTGGAGGTTTAAATAAATTGAAGGAATTGAGTGTCATGCGATGCAATAACTTGAAGATTATGCCACATGACCTTAGGTTGACATCTCTTGAGCGTCTCAGTCTCTTTGGTTGTTCAAGCCTTCAAAGTTTCCCAGAGATATCAGTCAATATGAAAAATATGCACACACTTGATTTAGAGAGGACTTCTATTACTGAGTTGCCACCTTCAATTTGCAATCTCATTGGACTTGAAACCTTGATCATAGAGGAATGTCCTAATCTTGAGCAACTGCCAGCTGGCATTTGTTTGTTGCCAAAGCTTTGGACACTAAACGCAAATTCTTGTAAAAGAATGAGGCATTTCAAGATGTATGATGTAGGAGAAGAAGCAGACTTATATTGCTATACATTGTCTTTGAAATTGAAACGTGTTTGTTTCTCAAATTGCAATTTGTCAGAGGACTCCCTTGCTCTTTGCCTATCTTACTTTACTAATATGACATATTTGGATCTAAGTTCCAATTATTTTACAACCCTTCCAGCATGCATCAAAGAATGTCACCATTTGAGATATCTTTTACTAAATAATTGCAAGCGACTTCAACATATTGAGGACATGCCACCAAACTTGGAAAGATTCAGTGCCGTATGTTGCATGTTATTGACTAGGTCATCTAAAAGCAAATTATTGTATCAGGCACTCAGCTTGCAACCTGGGAAAAGAAACTTTATTTTGCCTGGAGGAAAATTGCCAGAAAATCTTGACAAATATGGTAGGGAAAGCTCTGTGTCTTTTTGGGTTCGTGATGTGTTACCGACAGTTTTTCCGTGGATCCTTGTTAAAGATCATGATGATTTTCTCTCCAATTGTGCATTCCTAGTGCACATCAATAACACCAAGGTAGATATATCTTATGAGTGGCTTTTGTTATCAACAATGAAAATGGGTCATTTACATATATGTGATCTACAAAGCATGATTGGAAAGGCTAAACTCAGCCATGCATATAAATGGAATCATGTGAAGATTTCCATTAAGAGAAAGACACAAAATATAAAAAGTAAAAGTGAAATTCATTTTGCGCTTCATGTCTACAAGCTACAAAATAACTCAAACACCATCCGATTCATGGACCCTAGAACATATGATGATTGCAACCCATGGAAAAGAGTACAAAAACCACAGAATTGTGAAGAACTTGAGGATGGCATGCCTCACCTAGACATAGATACAAGGATGGCCAATCTCCATGAGCGAGCGTACCCATCCAGATGGACCTATGATGTGTTTTTGAGTTATGGAGATGATTATGGATCAAGCTTTGTTAGTCGTCTCTGCCATTGCATGTGTGCCAGAAGAATCCGTGTTTTGCCTAATGATGAATTCCTCACCCCTAGTGTGGAAGAATTCAATGCAATGGAAGAATCCAGGACAGCTATCATAATTATCTCCGAAAACTATGCATCCTCGACATCTTGTTTAAATAGCCTTGCAACCATTCTTGAGTGCTTCAGAAAAGAATGTCGATCCGTTTACATGATATTTTATAACATGGAGCCACCAAAGTTGCAATATCAAACAGGTAATTGTGAAGTAGTATTTGCTATGCTTGAGGAGAAATTAAAACACAACAAACAACAAGTGCAACAATGGAGGTTGGCTTTGTCCGAAGTAGTTTCAAGAGGCGGATACTATTGTTTCAATCCCAGGAATATGGCAGAAGATAAGTTTATTCAGGGGTTCATTAATGCAATCTCTTCAAGTATTAATGCATTTCCATTTCGCATTTGGGATAATTCAGTGGGACTTGAGTCTCGGGTACAGGAAATAATCTCGCTTCTGGATGTTGGGTCTAATGAGGAAGTCAAAATGGTAGGAATTTGTGGAATTTGCGGAATAGGTAAATCAACAATAGCAAGCGCTGTGTGTAATTTCATTGCTCATCATTTTGAAGATTTATGGTATTTTTCTCCTATATCAGAGGAGCACCGGTTTTTGAATGATTCGCCGTTTTCGGTTCGTCTTTATGAAAAAGCCAGGGGCAAACGTTTCAGTTTGGATGATTTCCATGGGATAATAAGACAACCTTGGTTTCGACAAAGGAAGGTTCTCGTAATTTTGGATGGTGTTGAAGGATTGGATCATTTACAAGCAGTTAATGAAGGATGTGATTGGTTTGGTTGCGGAAGCAGGATCATTATTACGACAAGGGATACACAGTTGTTAGTAAGTCATGGTATTGAAAAAATTTATGATGTCATGAATTTAAGTGATGATGAAGGCTTTTCAAATGCTTTCCTGGACTGCTTTTAA 4314 0.3732 MAQRSLSSSINYRWTYDVFLSFRGEDTRLGFVGHLYDSLRQRGIQAFIDDESIRIGEEITESLFKAIQESRIAIIVFSENYASSTFCLDELVQILQCFEEQGRLVYPVFYYVDPSDLRNQRGSYGKSLDLLEKRFKDDKQKQKVQKWRLAVSKAADLKGWHLKPGIANERECITKIISEVFSRVNHDPLDITRYLVGLVPRVKEVISLLELWSTKKTKMVGIWGVSGIGKSTIVRALCNLIANNFEGVCFLSNVRKESQMPNGLAHLQEKLLLKLVMEKDLKLGDFHEGIPIIKRRLCQKKILLILDDVDGLKQLEALAGNCDWFGLGSRIVITTRNKQLLVAHDVNRIYNVRELNDEDSLQLLSWYAFKKENVESDFLKVSNRAIQYCCGLPLAIEVLISNLRGKGVNEWHCALDQCERSQGGPVLESFRSSYDALGEIEKNIFLDLACFFKGENLRKVKGMLHCLHEIQPDYIIGVLIDKALINIEGDRVGMQGLIEDMGKMIVRQQSPGEPSERSRLWYYQDILHVLKRNTGTNKVEVIILNLPEGSEVQIKWSRKAFMKMENLKMLVIKNVSFSKCPKYLPNGLRWLEWKGYPFKVLPYNICSTELVYLDLSYSNFESLQPFTKKFHSLSCMNFRNCKFLQQTPNFSGVSNLRELWLDDCTNLIEIHHSVGGLNKLKELSVMRCNNLKIMPHDLRLTSLERLSLFGCSSLQSFPEISVNMKNMHTLDLERTSITELPPSICNLIGLETLIIEECPNLEQLPAGICLLPKLWTLNANSCKRMRHFKMYDVGEEADLYCYTLSLKLKRVCFSNCNLSEDSLALCLSYFTNMTYLDLSSNYFTTLPACIKECHHLRYLLLNNCKRLQHIEDMPPNLERFSAVCCMLLTRSSKSKLLYQALSLQPGKRNFILPGGKLPENLDKYGRESSVSFWVRDVLPTVFPWILVKDHDDFLSNCAFLVHINNTKVDISYEWLLLSTMKMGHLHICDLQSMIGKAKLSHAYKWNHVKISIKRKTQNIKSKSEIHFALHVYKLQNNSNTIRFMDPRTYDDCNPWKRVQKPQNCEELEDGMPHLDIDTRMANLHERAYPSRWTYDVFLSYGDDYGSSFVSRLCHCMCARRIRVLPNDEFLTPSVEEFNAMEESRTAIIIISENYASSTSCLNSLATILECFRKECRSVYMIFYNMEPPKLQYQTGNCEVVFAMLEEKLKHNKQQVQQWRLALSEVVSRGGYYCFNPRNMAEDKFIQGFINAISSSINAFPFRIWDNSVGLESRVQEIISLLDVGSNEEVKMVGICGICGIGKSTIASAVCNFIAHHFEDLWYFSPISEEHRFLNDSPFSVRLYEKARGKRFSLDDFHGIIRQPWFRQRKVLVILDGVEGLDHLQAVNEGCDWFGCGSRIIITTRDTQLLVSHGIEKIYDVMNLSDDEGFSNAFLDCF 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1567 1437 Gene3D Ribonuclease Inhibitor 798 890 IPR032675 -
Prci1g1567 1437 SUPERFAMILY L domain-like 553 893 - -
Prci1g1567 1437 SUPERFAMILY Toll/Interleukin receptor TIR domain 1086 1229 IPR035897 -
Prci1g1567 1437 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 186 - -
Prci1g1567 1437 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 160 IPR035897 -
Prci1g1567 1437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 782 IPR044974 GO:0006952
Prci1g1567 1437 Pfam TIR domain 1094 1252 IPR000157 GO:0007165
Prci1g1567 1437 Pfam TIR domain 16 186 IPR000157 GO:0007165
Prci1g1567 1437 SMART till_3 15 157 IPR000157 GO:0007165
Prci1g1567 1437 SMART till_3 1093 1228 IPR000157 GO:0007165
Prci1g1567 1437 Gene3D - 354 438 IPR042197 -
Prci1g1567 1437 Gene3D - 10 190 IPR035897 -
Prci1g1567 1437 Gene3D - 1088 1257 IPR035897 -
Prci1g1567 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 448 IPR027417 -
Prci1g1567 1437 SUPERFAMILY "Winged helix" DNA-binding domain 428 531 IPR036390 -
Prci1g1567 1437 ProSiteProfiles TIR domain profile. 14 155 IPR000157 GO:0007165
Prci1g1567 1437 PRINTS Disease resistance protein signature 296 310 - -
Prci1g1567 1437 PRINTS Disease resistance protein signature 698 714 - -
Prci1g1567 1437 PRINTS Disease resistance protein signature 389 403 - -
Prci1g1567 1437 PRINTS Disease resistance protein signature 219 234 - -
Prci1g1567 1437 ProSiteProfiles TIR domain profile. 1092 1256 IPR000157 GO:0007165
Prci1g1567 1437 SMART AAA_5 216 359 IPR003593 GO:0016887
Prci1g1567 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1429 IPR027417 -
Prci1g1567 1437 Gene3D - 191 349 IPR027417 -
Prci1g1567 1437 Gene3D - 1258 1415 IPR027417 -
Prci1g1567 1437 Pfam NB-ARC domain 1271 1429 IPR002182 GO:0043531
Prci1g1567 1437 Pfam NB-ARC domain 213 440 IPR002182 GO:0043531
Prci1g1567 1437 Gene3D Ribonuclease Inhibitor 536 796 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1567 Prci-Chr1 34900317 34911570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1567 16 788 WRKY Transcription Factor Family AT4G12020 29.937 5.98e-76 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1567 - - pcin:129311747 2869.72