Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1566 ATGAGGAGACCTTCAATTATTATTATCAGATCTCAGTCCAACCCTTTGCTCTTTCCTTTCCTGCGTTTTCGAGGTGAAGATACCCGTTTAGGTTTTGTTGGTCATCTCTATGATTCTCTGCGTCAGAGGGGAATCCAGGCCTTCATAGATGACGAATCCATCAGGATTGGCGAAGAAATCACAGAGTCTCTTTTCAAAGCCATACAAGAATCCAGGATAGCGATCATAGTTTTCTCCGAGAACTATGCATCCTCAACTTTTTGTCTCGATGAACTAGTCCAGATTCTTCAATGCTTCGAAGAACAAGGTCGATTGGTTTATCCAGTATTTTATTATGTGGATCCTTCGGATCTGCGAAATCAAAGAGGGAGTTATGGGAAATCATTGGATCTGCTTGAGAAAAGATTCAAGGATGACAAGCAAAAGCAAAAGGTGCAAAAATGGAGGTTGGCTGTGTCCAAAGCAGCTGATTTAAAAGGCTGGCATCTCAAACCTGGGATTGCAAATGAACGAGAATGTATTACAAAGATTATTAGCGAAGTTTTTTCTAGGGTTAATCATGATCCCTTAGACATTACTCGTTATCTAGTTGGACTTGTGCCTCGAGTGAAAGAAGTGATCTCACTTTTAGAGCTTTGGTCTACTAAGAAAACTAAAATGGTAGGGATTTGGGGAGTTAGTGGAATTGGTAAATCAACAATTGTAAGAGCCTTGTGTAATTTGATAGCTAATAATTTTGAAGGAGTATGCTTCCTTTCTAATGTAAGAAAAGAGTCCCAAATGCCAAATGGTTTGGCACATCTTCAAGAGAAATTACTCCTTAAATTAGTCATGGAAAAGGATCTCAAATTGGGTGATTTTCATGAAGGAATACCAATAATAAAACGTAGGCTTTGCCAGAAGAAAATTCTTTTGATTCTTGATGATGTTGATGGATTGAAACAGTTAGAAGCACTAGCTGGAAATTGCGATTGGTTTGGTCTTGGAAGTAGAATTGTCATAACAACAAGGAATAAACAGTTGTTAGTAGCTCATGATGTTAATAGAATTTATAATGTTCGAGAATTAAATGATGAGGACTCTCTTCAATTGCTTAGTTGGTATGCCTTTAAAAAGGAGAATGTGGAGTCTGACTTCTTAAAGGTTTCCAATCGTGCAATACAATATTGTTGTGGCCTTCCATTAGCTATAGAAGTGTTGATTTCTAACTTGCGAGGTAAAGGAGTCAATGAATGGCACTGTGCATTAGATCAATGTGAAAGAAGTCAAGGAGGACCAGTTTTGGAATCCTTTAGATCAAGCTATGATGCTTTAGGAGAAATTGAGAAAAACATTTTCTTGGACTTGGCATGTTTCTTCAAAGGTGAAAATTTAAGAAAAGTCAAGGGTATGTTGCATTGTTTACATGAAATCCAACCAGACTACATTATTGGAGTCTTGATTGATAAAGCCCTCATCAACATTGAAGGAGATCGAGTGGGAATGCAAGGTTTGATAGAAGATATGGGTAAAATGATTGTTCGACAGCAATCACCTGGTGAACCTAGTGAACGAAGTAGGTTATGGTACTACCAAGATATTCTTCATGTTTTAAAACGAAACACGGGAACTAATAAAGTTGAAGTCATAATTCTAAACCTACCAGAAGGTAGTGAAGTTCAAATAAAATGGAGCAGAAAGGCATTCATGAAGATGGAGAATCTTAAAATGCTTGTGATAAAAAATGTAAGCTTTTCTAAATGCCCCAAATATCTCCCAAATGGCTTAAGGTGGTTGGAATGGAAGGGCTATCCTTTCAAGGTTTTGCCATATAATATTTGCTCCACAGAACTTGTTTATCTTGACTTGTCTTACAGTAATTTTGAATCACTCCAACCATTTACAAAGAAGTTCCACAGTTTAAGTTGTATGAACTTTAGAAATTGCAAATTTCTACAACAAACACCAAATTTTTCTGGAGTTTCTAATTTAAGAGAGTTGTGGCTTGATGATTGTACAAATTTAATTGAAATACATCATTCAGTTGGAGGTTTAAATAAATTGAAGGAATTGAGTGTCATGCGATGCAATAACTTGAAGATTATGCCACATGACCTTAGGTTGACATCTCTTGAGCGTCTCAGTCTCTTTGGTTGTTCAAGCCTTCAAAGTTTCCCAGAGATATCAGTCAATATGAAAAATATGCACACACTTGATTTAGAGAGGACTTCTATTACTGAGTTGCCACCTTCAATTTGCAATCTCATTGGACTTGAAACCTTGATCATAGAGGAATGTCCTAATCTTGAGCAACTGCCAGCTGGCATTTGTTTGTTGCCAAAGCTTTGGACACTAAACGCAAATTCTTGTAAAAGAATGAGGCATTTCAAGATGTATGATGTAGGAGAAGAAGCAGACTTATATTGCTATACATTGTCTTTGAAATTGAAACGTGTTTGTTTCTCAAATTGCAATTTGTCAGAGGACTCCCTTGCTCTTTGCCTATCTTACTTTACTAATATGACATATTTGGATCTAAGTTCCAATTATTTTACAACCCTTCCAGCATGCATCAAAGAATGTCACCATTTGAGATATCTTTTACTAAATAATTGCAAGCGACTTCAACATATTGAGGACATGCCACCAAACTTGGAAAGATTCAGTGCCGTATGTTGCATGTTATTGACTAGGTCATCTAAAAGCAAATTATTGTATCAGGCACTCAGCTTGCAACCTGGGAAAAGAAACTTTATTTTGCCTGGAGGAAAATTGCCAGAAAATCTTGACAAATATGGTAGGGAAAGCTCTGTGTCTTTTTGGGTTCGTGATGTGTTACCGACAGTTTTTCCGTGGATCCTTGTTAAAGATCATGATGATTTTCTCTCCAATTGTGCATTCCTAGTGCACATCAATAACACCAAGGTAGATATATCTTATGAGTGGCTTTTGTTATCAACAATGAAAATGGGTCATTTACATATATGTGATCTACAAAGCATGATTGGAAAGGCTAAACTCAGCCATGCATATAAATGGAATCATGTGAAGATTTCCATTAAGAGAAAGACACAAAATATAAAAAGTAAAAGTGAAATTCATTTTGCGCTTCATGTCTACAAGCTACAAAATAACTCAAACACCATCCGATTCATGGACCCTAGAACATATGATGATTGCAACCCATGGAAAAGAGTACAAAAACCACAGAATTGTGAAGAACTTGAGGATGGCATGCCTCACCTAGACATAGATACAAGGATGGCCAATCTCCATGAGCGAGCGTACCCATCCAGATGGACCTATGATGTGTTTTTGAGTTATGGAGATGATTATGGATCAAGCTTTGTTAGTCGTCTCTGCCATTGCATGTGTGCCAGAAGAATCCGTGTTTTGCCTAATGATGAATTCCTCACCCCTAGTGTGGAAGAATTCAATGCAATGGAAGAATCCAGGACAGCTATCATAATTATCTCCGAAAACTATGCATCCTCGACATCTTGTTTAAATAGCCTTGCAACCATTCTTGAGTGCTTCAGAAAAGAATGTCGATCCGTTTACATGATATTTTATAACATGGAGCCACCAAAGTTGCAATATCAAACAGGTAATTGTGAAGTAGTATTTGCTATGCTTGAGGAGAAATTAAAACACAACAAACAACAAGTGCAACAATGGAGGTTGGCTTTGTCCGAAGTAGTTTCAAGAGGCGGATACTATTGTTTCAATCCCAGGAATATGGCAGAAGATAAGTTTATTCAGGGGTTCATTAATGCAATCTCTTCAAGTATTAATGCATTTCCATTTCGCATTTGGGATAATTCAGTGGGACTTGAGTCTCGGGTACAGGAAATAATCTCGCTTCTGGATGTTGGGTCTAATGAGGAAGTCAAAATGGTAGGAATTTGTGGAATTTGCGGAATAGGTAAATCAACAATAGCAAGCGCTGTGTGTAATTTCATTGCTCATCATTTTGAAGATTTATGGTATTTTTCTCCTATATCAGAGGAGCACCGGTTTTTGAATGATTCGCCGTTTTCGGTTCGTCTTTATGAAAAAGCCAGGGGCAAACGTTTCAGTTTGGATGATTTCCATGGGATAATAAGACAACCTTGGTTTCGACAAAGGAAGGTTCTCGTAATTTTGGATGGTGTTGAAGGATTGGATCATTTACAAGCAGTTAATGAAGGATGTGATTGGTTTGGTTGCGGAAGCAGGATCATTATTACGACAAGGGATACACAGTTGTTAGTAAGTCATGGTATTGAAAAAATTTATGATGTCATGAATTTAAGTGATGATGAAGGCTTTTCAAATGCTTTCCTGGACTGCTTTTAA 4317 0.3729 MRRPSIIIIRSQSNPLLFPFLRFRGEDTRLGFVGHLYDSLRQRGIQAFIDDESIRIGEEITESLFKAIQESRIAIIVFSENYASSTFCLDELVQILQCFEEQGRLVYPVFYYVDPSDLRNQRGSYGKSLDLLEKRFKDDKQKQKVQKWRLAVSKAADLKGWHLKPGIANERECITKIISEVFSRVNHDPLDITRYLVGLVPRVKEVISLLELWSTKKTKMVGIWGVSGIGKSTIVRALCNLIANNFEGVCFLSNVRKESQMPNGLAHLQEKLLLKLVMEKDLKLGDFHEGIPIIKRRLCQKKILLILDDVDGLKQLEALAGNCDWFGLGSRIVITTRNKQLLVAHDVNRIYNVRELNDEDSLQLLSWYAFKKENVESDFLKVSNRAIQYCCGLPLAIEVLISNLRGKGVNEWHCALDQCERSQGGPVLESFRSSYDALGEIEKNIFLDLACFFKGENLRKVKGMLHCLHEIQPDYIIGVLIDKALINIEGDRVGMQGLIEDMGKMIVRQQSPGEPSERSRLWYYQDILHVLKRNTGTNKVEVIILNLPEGSEVQIKWSRKAFMKMENLKMLVIKNVSFSKCPKYLPNGLRWLEWKGYPFKVLPYNICSTELVYLDLSYSNFESLQPFTKKFHSLSCMNFRNCKFLQQTPNFSGVSNLRELWLDDCTNLIEIHHSVGGLNKLKELSVMRCNNLKIMPHDLRLTSLERLSLFGCSSLQSFPEISVNMKNMHTLDLERTSITELPPSICNLIGLETLIIEECPNLEQLPAGICLLPKLWTLNANSCKRMRHFKMYDVGEEADLYCYTLSLKLKRVCFSNCNLSEDSLALCLSYFTNMTYLDLSSNYFTTLPACIKECHHLRYLLLNNCKRLQHIEDMPPNLERFSAVCCMLLTRSSKSKLLYQALSLQPGKRNFILPGGKLPENLDKYGRESSVSFWVRDVLPTVFPWILVKDHDDFLSNCAFLVHINNTKVDISYEWLLLSTMKMGHLHICDLQSMIGKAKLSHAYKWNHVKISIKRKTQNIKSKSEIHFALHVYKLQNNSNTIRFMDPRTYDDCNPWKRVQKPQNCEELEDGMPHLDIDTRMANLHERAYPSRWTYDVFLSYGDDYGSSFVSRLCHCMCARRIRVLPNDEFLTPSVEEFNAMEESRTAIIIISENYASSTSCLNSLATILECFRKECRSVYMIFYNMEPPKLQYQTGNCEVVFAMLEEKLKHNKQQVQQWRLALSEVVSRGGYYCFNPRNMAEDKFIQGFINAISSSINAFPFRIWDNSVGLESRVQEIISLLDVGSNEEVKMVGICGICGIGKSTIASAVCNFIAHHFEDLWYFSPISEEHRFLNDSPFSVRLYEKARGKRFSLDDFHGIIRQPWFRQRKVLVILDGVEGLDHLQAVNEGCDWFGCGSRIIITTRDTQLLVSHGIEKIYDVMNLSDDEGFSNAFLDCF 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1566 1438 SUPERFAMILY L domain-like 554 894 - -
Prci1g1566 1438 SUPERFAMILY "Winged helix" DNA-binding domain 429 532 IPR036390 -
Prci1g1566 1438 Gene3D - 1259 1416 IPR027417 -
Prci1g1566 1438 Gene3D - 192 350 IPR027417 -
Prci1g1566 1438 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 187 - -
Prci1g1566 1438 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 161 IPR035897 -
Prci1g1566 1438 SMART till_3 20 158 IPR000157 GO:0007165
Prci1g1566 1438 SMART till_3 1094 1229 IPR000157 GO:0007165
Prci1g1566 1438 Gene3D Ribonuclease Inhibitor 799 891 IPR032675 -
Prci1g1566 1438 Gene3D - 355 439 IPR042197 -
Prci1g1566 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Prci1g1566 1438 Gene3D - 1089 1258 IPR035897 -
Prci1g1566 1438 Gene3D - 19 191 IPR035897 -
Prci1g1566 1438 Pfam NB-ARC domain 214 441 IPR002182 GO:0043531
Prci1g1566 1438 Pfam NB-ARC domain 1272 1430 IPR002182 GO:0043531
Prci1g1566 1438 SUPERFAMILY Toll/Interleukin receptor TIR domain 1087 1230 IPR035897 -
Prci1g1566 1438 PRINTS Disease resistance protein signature 220 235 - -
Prci1g1566 1438 PRINTS Disease resistance protein signature 297 311 - -
Prci1g1566 1438 PRINTS Disease resistance protein signature 390 404 - -
Prci1g1566 1438 PRINTS Disease resistance protein signature 699 715 - -
Prci1g1566 1438 Pfam TIR domain 20 187 IPR000157 GO:0007165
Prci1g1566 1438 Pfam TIR domain 1095 1253 IPR000157 GO:0007165
Prci1g1566 1438 ProSiteProfiles TIR domain profile. 15 156 IPR000157 GO:0007165
Prci1g1566 1438 SMART AAA_5 217 360 IPR003593 GO:0016887
Prci1g1566 1438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 783 IPR044974 GO:0006952
Prci1g1566 1438 Gene3D Ribonuclease Inhibitor 537 797 IPR032675 -
Prci1g1566 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1258 1430 IPR027417 -
Prci1g1566 1438 ProSiteProfiles TIR domain profile. 1093 1257 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1566 Prci-Chr1 34900314 34911570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1566 32 789 WRKY Transcription Factor Family AT4G12020 30.039 6.90e-75 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1566 - - pcin:129311747 2903.62