Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1565 ATGAGGAGACCTTCAATTATTATTATCAGATCTCAGTCCAACCCTTTGCTCTTTCCTTTCCTGCGTTTTCGAGGTGAAGATACCCGTTTAGGTTTTGTTGGTCATCTCTATGATTCTCTGCGTCAGAGGGGAATCCAGGCCTTCATAGATGACGAATCCATCAGGATTGGCGAAGAAATCACAGAGTCTCTTTTCAAAGCCATACAAGAATCCAGGATAGCGATCATAGTTTTCTCCGAGAACTATGCATCCTCAACTTTTTGTCTCGATGAACTAGTCCAGATTCTTCAATGCTTCGAAGAACAAGGTCGATTGGTTTATCCAGTATTTTATTATGTGGATCCTTCGGATCTGCGAAATCAAAGAGGGAGTTATGGGAAATCATTGGATCTGCTTGAGAAAAGATTCAAGGATGACAAGCAAAAGCAAAAGGTGCAAAAATGGAGGTTGGCTGTGTCCAAAGCAGCTGATTTAAAAGGCTGGCATCTCAAACCTGGGATTGCAAATGAACGAGAATGTATTACAAAGATTATTAGCGAAGTTTTTTCTAGGGTTAATCATGATCCCTTAGACATTACTCGTTATCTAGTTGGACTTGTGCCTCGAGTGAAAGAAGTGATCTCACTTTTAGAGCTTTGGTCTACTAAGAAAACTAAAATGGTAGGGATTTGGGGAGTTAGTGGAATTGGTAAATCAACAATTGTAAGAGCCTTGTGTAATTTGATAGCTAATAATTTTGAAGGAGTATGCTTCCTTTCTAATGTAAGAAAAGAGTCCCAAATGCCAAATGGTTTGGCACATCTTCAAGAGAAATTACTCCTTAAATTAGTCATGGAAAAGGATCTCAAATTGGGTGATTTTCATGAAGGAATACCAATAATAAAACGTAGGCTTTGCCAGAAGAAAATTCTTTTGATTCTTGATGATGTTGATGGATTGAAACAGTTAGAAGCACTAGCTGGAAATTGCGATTGGTTTGGTCTTGGAAGTAGAATTGTCATAACAACAAGGAATAAACAGTTGTTAGTAGCTCATGATGTTAATAGAATTTATAATGTTCGAGAATTAAATGATGAGGACTCTCTTCAATTGCTTAGTTGGTATGCCTTTAAAAAGGAGAATGTGGAGTCTGACTTCTTAAAGGTTTCCAATCGTGCAATACAATATTGTTGTGGCCTTCCATTAGCTATAGAAGTGTTGATTTCTAACTTGCGAGGTAAAGGAGTCAATGAATGGCACTGTGCATTAGATCAATGTGAAAGAAGTCAAGGAGGACCAGTTTTGGAATCCTTTAGATCAAGCTATGATGCTTTAGGAGAAATTGAGAAAAACATTTTCTTGGACTTGGCATGTTTCTTCAAAGGTGAAAATTTAAGAAAAGTCAAGGGTATGTTGCATTGTTTACATGAAATCCAACCAGACTACATTATTGGAGTCTTGATTGATAAAGCCCTCATCAACATTGAAGGAGATCGAGTGGGAATGCAAGGTTTGATAGAAGATATGGGTAAAATGATTGTTCGACAGCAATCACCTGGTGAACCTAGTGAACGAAGTAGGTTATGGTACTACCAAGATATTCTTCATGTTTTAAAACGAAACACGAAGTTCCACAGTTTAAGTTGTATGAACTTTAGAAATTGCAAATTTCTACAACAAACACCAAATTTTTCTGGAGTTTCTAATTTAAGAGAGTTGTGGCTTGATGATTGTACAAATTTAATTGAAATACATCATTCAGTTGGAGGTTTAAATAAATTGAAGGAATTGAGTGTCATGCGATGCAATAACTTGAAGATTATGCCACATGACCTTAGGTTGACATCTCTTGAGCGTCTCAGTCTCTTTGGTTGTTCAAGCCTTCAAAGTTTCCCAGAGATATCAGTCAATATGAAAAATATGCACACACTTGATTTAGAGAGGACTTCTATTACTGAGTTGCCACCTTCAATTTGCAATCTCATTGGACTTGAAACCTTGATCATAGAGGAATGTCCTAATCTTGAGCAACTGCCAGCTGGCATTTGTTTGTTGCCAAAGCTTTGGACACTAAACGCAAATTCTTGTAAAAGAATGAGGCATTTCAAGATGTATGATGTAGGAGAAGAAGCAGACTTATATTGCTATACATTGTCTTTGAAATTGAAACGTGTTTGTTTCTCAAATTGCAATTTGTCAGAGGACTCCCTTGCTCTTTGCCTATCTTACTTTACTAATATGACATATTTGGATCTAAGTTCCAATTATTTTACAACCCTTCCAGCATGCATCAAAGAATGTCACCATTTGAGATATCTTTTACTAAATAATTGCAAGCGACTTCAACATATTGAGGACATGCCACCAAACTTGGAAAGATTCAGTGCCGTATGTTGCATGTTATTGACTAGGTCATCTAAAAGCAAATTATTGTATCAGGCACTCAGCTTGCAACCTGGGAAAAGAAACTTTATTTTGCCTGGAGGAAAATTGCCAGAAAATCTTGACAAATATGGTAGGGAAAGCTCTGTGTCTTTTTGGGTTCGTGATGTGTTACCGACAGTTTTTCCGTGGATCCTTGTTAAAGATCATGATGATTTTCTCTCCAATTGTGCATTCCTAGTGCACATCAATAACACCAAGGTAGATATATCTTATGAGTGGCTTTTGTTATCAACAATGAAAATGGGTCATTTACATATATGTGATCTACAAAGCATGATTGGAAAGGCTAAACTCAGCCATGCATATAAATGGAATCATGTGAAGATTTCCATTAAGAGAAAGACACAAAATATAAAAAGTAAAAGTGAAATTCATTTTGCGCTTCATGTCTACAAGCTACAAAATAACTCAAACACCATCCGATTCATGGACCCTAGAACATATGATGATTGCAACCCATGGAAAAGAGTACAAAAACCACAGAATTGTGAAGAACTTGAGGATGGCATGCCTCACCTAGACATAGATACAAGGATGGCCAATCTCCATGAGCGAGCGTACCCATCCAGATGGACCTATGATGTGTTTTTGAGTTATGGAGATGATTATGGATCAAGCTTTGTTAGTCGTCTCTGCCATTGCATGTGTGCCAGAAGAATCCGTGTTTTGCCTAATGATGAATTCCTCACCCCTAGTGTGGAAGAATTCAATGCAATGGAAGAATCCAGGACAGCTATCATAATTATCTCCGAAAACTATGCATCCTCGACATCTTGTTTAAATAGCCTTGCAACCATTCTTGAGTGCTTCAGAAAAGAATGTCGATCCGTTTACATGATATTTTATAACATGGAGCCACCAAAGTTGCAATATCAAACAGGTAATTGTGAAGTAGTATTTGCTATGCTTGAGGAGAAATTAAAACACAACAAACAACAAGTGCAACAATGGAGGTTGGCTTTGTCCGAAGTAGTTTCAAGAGGCGGATACTATTGTTTCAATCCCAGGAATATGGCAGAAGATAAGTTTATTCAGGGGTTCATTAATGCAATCTCTTCAAGTATTAATGCATTTCCATTTCGCATTTGGGATAATTCAGTGGGACTTGAGTCTCGGGTACAGGAAATAATCTCGCTTCTGGATGTTGGGTCTAATGAGGAAGTCAAAATGGTAGGAATTTGTGGAATTTGCGGAATAGGTAAATCAACAATAGCAAGCGCTGTGTGTAATTTCATTGCTCATCATTTTGAAGATTTATGGTATTTTTCTCCTATATCAGAGGAGCACCGGTTTTTGAATGATTCGCCGTTTTCGGTTCGTCTTTATGAAAAAGCCAGGGGCAAACGTTTCAGTTTGGATGATTTCCATGGGATAATAAGACAACCTTGGTTTCGACAAAGGAAGGTTCTCGTAATTTTGGATGGTGTTGAAGGATTGGATCATTTACAAGCAGTTAATGAAGGATGTGATTGGTTTGGTTGCGGAAGCAGGATCATTATTACGACAAGGGATACACAGTTGTTAGTAAGTCATGGTATTGAAAAAATTTATGATGTCATGAATTTAAGTGATGATGAAGGCTTTTCAAATGCTTTCCTGGACTGCTTTTAA 4035 0.3747 MRRPSIIIIRSQSNPLLFPFLRFRGEDTRLGFVGHLYDSLRQRGIQAFIDDESIRIGEEITESLFKAIQESRIAIIVFSENYASSTFCLDELVQILQCFEEQGRLVYPVFYYVDPSDLRNQRGSYGKSLDLLEKRFKDDKQKQKVQKWRLAVSKAADLKGWHLKPGIANERECITKIISEVFSRVNHDPLDITRYLVGLVPRVKEVISLLELWSTKKTKMVGIWGVSGIGKSTIVRALCNLIANNFEGVCFLSNVRKESQMPNGLAHLQEKLLLKLVMEKDLKLGDFHEGIPIIKRRLCQKKILLILDDVDGLKQLEALAGNCDWFGLGSRIVITTRNKQLLVAHDVNRIYNVRELNDEDSLQLLSWYAFKKENVESDFLKVSNRAIQYCCGLPLAIEVLISNLRGKGVNEWHCALDQCERSQGGPVLESFRSSYDALGEIEKNIFLDLACFFKGENLRKVKGMLHCLHEIQPDYIIGVLIDKALINIEGDRVGMQGLIEDMGKMIVRQQSPGEPSERSRLWYYQDILHVLKRNTKFHSLSCMNFRNCKFLQQTPNFSGVSNLRELWLDDCTNLIEIHHSVGGLNKLKELSVMRCNNLKIMPHDLRLTSLERLSLFGCSSLQSFPEISVNMKNMHTLDLERTSITELPPSICNLIGLETLIIEECPNLEQLPAGICLLPKLWTLNANSCKRMRHFKMYDVGEEADLYCYTLSLKLKRVCFSNCNLSEDSLALCLSYFTNMTYLDLSSNYFTTLPACIKECHHLRYLLLNNCKRLQHIEDMPPNLERFSAVCCMLLTRSSKSKLLYQALSLQPGKRNFILPGGKLPENLDKYGRESSVSFWVRDVLPTVFPWILVKDHDDFLSNCAFLVHINNTKVDISYEWLLLSTMKMGHLHICDLQSMIGKAKLSHAYKWNHVKISIKRKTQNIKSKSEIHFALHVYKLQNNSNTIRFMDPRTYDDCNPWKRVQKPQNCEELEDGMPHLDIDTRMANLHERAYPSRWTYDVFLSYGDDYGSSFVSRLCHCMCARRIRVLPNDEFLTPSVEEFNAMEESRTAIIIISENYASSTSCLNSLATILECFRKECRSVYMIFYNMEPPKLQYQTGNCEVVFAMLEEKLKHNKQQVQQWRLALSEVVSRGGYYCFNPRNMAEDKFIQGFINAISSSINAFPFRIWDNSVGLESRVQEIISLLDVGSNEEVKMVGICGICGIGKSTIASAVCNFIAHHFEDLWYFSPISEEHRFLNDSPFSVRLYEKARGKRFSLDDFHGIIRQPWFRQRKVLVILDGVEGLDHLQAVNEGCDWFGCGSRIIITTRDTQLLVSHGIEKIYDVMNLSDDEGFSNAFLDCF 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1565 1344 PRINTS Disease resistance protein signature 605 621 - -
Prci1g1565 1344 PRINTS Disease resistance protein signature 220 235 - -
Prci1g1565 1344 PRINTS Disease resistance protein signature 297 311 - -
Prci1g1565 1344 PRINTS Disease resistance protein signature 390 404 - -
Prci1g1565 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Prci1g1565 1344 Pfam NB-ARC domain 214 441 IPR002182 GO:0043531
Prci1g1565 1344 Pfam NB-ARC domain 1178 1336 IPR002182 GO:0043531
Prci1g1565 1344 SUPERFAMILY L domain-like 531 800 - -
Prci1g1565 1344 ProSiteProfiles TIR domain profile. 999 1163 IPR000157 GO:0007165
Prci1g1565 1344 Gene3D Ribonuclease Inhibitor 524 697 IPR032675 -
Prci1g1565 1344 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 187 - -
Prci1g1565 1344 Gene3D - 355 439 IPR042197 -
Prci1g1565 1344 SMART till_3 20 158 IPR000157 GO:0007165
Prci1g1565 1344 SMART till_3 1000 1135 IPR000157 GO:0007165
Prci1g1565 1344 Pfam TIR domain 20 187 IPR000157 GO:0007165
Prci1g1565 1344 Pfam TIR domain 1001 1159 IPR000157 GO:0007165
Prci1g1565 1344 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 161 IPR035897 -
Prci1g1565 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1164 1336 IPR027417 -
Prci1g1565 1344 SUPERFAMILY "Winged helix" DNA-binding domain 429 532 IPR036390 -
Prci1g1565 1344 ProSiteProfiles TIR domain profile. 15 156 IPR000157 GO:0007165
Prci1g1565 1344 Gene3D - 192 350 IPR027417 -
Prci1g1565 1344 Gene3D - 1165 1322 IPR027417 -
Prci1g1565 1344 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 689 IPR044974 GO:0006952
Prci1g1565 1344 SMART AAA_5 217 360 IPR003593 GO:0016887
Prci1g1565 1344 Gene3D - 995 1164 IPR035897 -
Prci1g1565 1344 Gene3D - 19 191 IPR035897 -
Prci1g1565 1344 Gene3D Ribonuclease Inhibitor 705 797 IPR032675 -
Prci1g1565 1344 SUPERFAMILY Toll/Interleukin receptor TIR domain 993 1136 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1565 Prci-Chr1 34900313 34911570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1565 221 693 WRKY Transcription Factor Family AT5G45050 29.966 1.33e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1565 - - pcin:129311747 1676.76