Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1555 ATGAGCTGTTTCAACCTTGTGCTTCTGTTGCTCCTGTCACACATGGTGCTTTCACAGCTTCATCCAGCGGAAAGAGCTGCTCTGTTGCTTCTGAGGGATTCCTTAACTTCTCCTTCTGATTTACATGGGAATTGGACAGGACCACCTTGTATACACAGTCTAAGTAGATGGAAAGGTATTACTTGTTCTAATTGGCATGTTGTTCAGATTGTTCTTGAAGGGTTTCAGCTTCTTGGCTATTTGCCTCCTGCATTCCCTCAAAACATAACATTCTTAACTCAGCTTAACCTCAGAAACAATTCCATTTCTGGGACCCTGCCAAATCTCACCAACTTGGTGTTCTTGGAACATGTTTTGCTTTCATATAATCGCTTCTACGGGTCAATTCCAGTGGAGTATGTTGGCTTGCCTGGTCTGAAGGAATTGGAGCTGCAAAAAAATTACTTAGATGGTCAAATCCCACCTTTTGATCAAGCATCATTGACAAATTTCAATGTCTCTTACAATCATCTGGTGGGACCAATTCCTCAAACTTCTGTGCTGCAGAAATTTCCTAAGAGCTCTTTCGATAATAATTCAGATCTCTGTGGGAAGCCATTGGATATTTTGTGTCCTGCTCCTTCTCCATCCCCTCCTTATGCACCAGCTCCAAGCCCAGCAACAGCAAAAGAAAACAAGAGATTTCCAGTTTGGATTATTGCTGTGATGATTACAGGACCTACACTGGTTTTACTTCTAATTATTATCGTCTTCTTTTTCTGTAATAAGAGGAATCAATTAAAAGAAACAACCAGAAATTATTCTCCAGGATATGGTTTTGGAGCATGGGCAAAGAATATGATGTCCTATTCATTGAGCACTGAAGATCCTGAAAGATCAGGAATATTGGAAATTTACAGCAAGGAATTACCAATTTTTGACTTGGATGATTTATTAAGGGCATCAGCAGAAATTCTAGGCAAGGGAAACATAGGCACTACATATAAAGCAACGTTTGAAACTGGTGCTGTTGTTGCTGTGAAGAGACTTGATCACATGAATGGATTGGGAAAGAAGGAATTCCTCCAGCACATGAAATTGCAAGCAAAGCTGAAGCATGAAAATCTGGTTGAAGTCATCTCTTTCTATTACTCAGACGAGGAAAAGCTGGCGGTTTATGAGTTTATCCCTTGTAGTAGCTCTTTGTTTGAGCTAATCCATGGTAGTAGAGGAGTTGGAAGAACTCCTCTTAATTGGTCCACAAGGCTGGCCATAATCAAAGACATAGCAAAAGGTCTAGCTTTCCTTCATCACTCTTTGCCTTCTCAGAAGGTCCCTCATGCCAACCTAAGAACATCCAACGTCCTCATTCGTCAAGATGCTCGAGGTTACAATTTGAAGCTCACGGACTTTGGCTTCTTACCTTTGCTTTCTGCTAAAAAAGGAACAGAAAAGCTAGCTATCAGCAAGTCACCTGAATTTGTCCAAGGGAAGAAACTGACACGCAAAGCTGACGTCTATTGCTTTGGAATCATCATCCTTGAGGTAATAACTGGGAAAGTTCCAGGTGAAAGCCTGGGTGAGATTGAAGAAACAACCAGTGATATTGCTGAATGGGTGAGAACAGTGGTGAACAGTGATTGGTCCACAGATATACTGGATGCTGAGATATTAGCAGCAAGAGAAGGGCATGGTGCTATGTTCGAGCTAACAGAGATAGCTCTACAGTGTACAGATATGACACCAGAGAGACGGCCTAAAATGAATGAAGTTTTGGCCAGAATAGAAGGGATAGAGTAA 1779 0.4143 MSCFNLVLLLLLSHMVLSQLHPAERAALLLLRDSLTSPSDLHGNWTGPPCIHSLSRWKGITCSNWHVVQIVLEGFQLLGYLPPAFPQNITFLTQLNLRNNSISGTLPNLTNLVFLEHVLLSYNRFYGSIPVEYVGLPGLKELELQKNYLDGQIPPFDQASLTNFNVSYNHLVGPIPQTSVLQKFPKSSFDNNSDLCGKPLDILCPAPSPSPPYAPAPSPATAKENKRFPVWIIAVMITGPTLVLLLIIIVFFFCNKRNQLKETTRNYSPGYGFGAWAKNMMSYSLSTEDPERSGILEIYSKELPIFDLDDLLRASAEILGKGNIGTTYKATFETGAVVAVKRLDHMNGLGKKEFLQHMKLQAKLKHENLVEVISFYYSDEEKLAVYEFIPCSSSLFELIHGSRGVGRTPLNWSTRLAIIKDIAKGLAFLHHSLPSQKVPHANLRTSNVLIRQDARGYNLKLTDFGFLPLLSAKKGTEKLAISKSPEFVQGKKLTRKADVYCFGIIILEVITGKVPGESLGEIEETTSDIAEWVRTVVNSDWSTDILDAEILAAREGHGAMFELTEIALQCTDMTPERRPKMNEVLARIEGIE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1555 592 SUPERFAMILY L domain-like 20 187 - -
Prci1g1555 592 Gene3D Ribonuclease Inhibitor 21 206 IPR032675 -
Prci1g1555 592 Gene3D Phosphorylase Kinase; domain 1 281 388 - -
Prci1g1555 592 SUPERFAMILY Protein kinase-like (PK-like) 316 589 IPR011009 -
Prci1g1555 592 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Prci1g1555 592 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Prci1g1555 592 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 592 IPR046959 -
Prci1g1555 592 Pfam Protein kinase domain 316 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1555 592 Gene3D Transferase(Phosphotransferase) domain 1 392 592 - -
Prci1g1555 592 ProSiteProfiles Protein kinase domain profile. 313 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1555 Prci-Chr1 34823832 34827205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1555 27 591 Receptor kinase-like Gene Family AT2G36570 34.921 6.22e-102 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci1g1555 Pkinase 9.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1555 - - gmx:102668068 771.541