Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1543 ATGGATGCACCACTCTGTTCTAATGGCTGTGGTTTCTTTGGTTCTCACCAAAATCAAAACATGTGCTCTAAGTGTTTCAAGGATCATATTCTGAAGCTCAATGAACAGATCTATGAATCAATGAGAAATATAATTGTTTCGTCTTCTTCTCCTTCTTCCTCTAATGAGTCTTCGATCGAGTATTTTAAGGCTGTTCTCACTAAATCTGATGAAATCCAAGAGAAAAAGAGATGCAAGAGTTGCAACAAAAAGGTCGGAGTCACAGGATTCACGTGCCGATGTGGAGATTTATTTTGTGGAAAACATAGATATCCAGAGGAGCATTCATGTACAATAGATTATAAGCATATAGGCCGTGAACTCATTAAGAAACAAAACCCGCTTTTTAAAGCTCCTAAGCTTTGA 405 0.3753 MDAPLCSNGCGFFGSHQNQNMCSKCFKDHILKLNEQIYESMRNIIVSSSSPSSSNESSIEYFKAVLTKSDEIQEKKRCKSCNKKVGVTGFTCRCGDLFCGKHRYPEEHSCTIDYKHIGRELIKKQNPLFKAPKL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1543 134 SUPERFAMILY AN1-like Zinc finger 68 132 IPR035896 -
Prci1g1543 134 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Prci1g1543 134 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Prci1g1543 134 Gene3D - 1 59 - -
Prci1g1543 134 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Prci1g1543 134 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Prci1g1543 134 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 134 - -
Prci1g1543 134 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Prci1g1543 134 Gene3D - 64 121 IPR035896 -
Prci1g1543 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 38 - -
Prci1g1543 134 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Prci1g1543 134 FunFam Zinc finger AN1-type containing 6 50 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1543 Prci-Chr1 34655240 34655644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1543 5 134 C2H2 Transcription Factor Family AT3G52800 39.869 1.07e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1543 - - pcin:129303887 228.794