Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1542 ATGGATCCTCCACTCTGTTCTAATGGCTGTGGCTTCTTTGGTTCCCAACAAAATCAAAACATGTGCTCTAAGTGTTACAAGGATCATATTCTGAAGCTCAATGAACAGATCTGTGAATCAATGAGAGATATCACTGTATCGTCTTCTTCTCCTTCTTCCTCTAATGGGTCCTCGATCCAGATGAATTTTAAGGCTTCTCTCACTGAATCTGATGAAATCCCAGAGAAAAAGAGATGCAAGAGTTGCAACAAAAAGGTCGGAGTCACAGGATTCACGTGCCGATGTGGAGATTTATTCTGTGGAAAACATAGATATCCAGAAGAACATTCATGTACGGTGGATTATAAGCAGATTGGTCGTGAACTCATTGAGAAACAAAACCCTATTTGCAGAGCTCATAAACATTCAAGAGTTTAG 417 0.4005 MDPPLCSNGCGFFGSQQNQNMCSKCYKDHILKLNEQICESMRDITVSSSSPSSSNGSSIQMNFKASLTESDEIPEKKRCKSCNKKVGVTGFTCRCGDLFCGKHRYPEEHSCTVDYKQIGRELIEKQNPICRAHKHSRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1542 138 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Prci1g1542 138 Gene3D - 64 122 IPR035896 -
Prci1g1542 138 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Prci1g1542 138 ProSiteProfiles Zinc finger AN1-type profile. 73 119 IPR000058 GO:0008270
Prci1g1542 138 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Prci1g1542 138 Pfam AN1-like Zinc finger 79 116 IPR000058 GO:0008270
Prci1g1542 138 FunFam Zinc finger AN1-type containing 6 52 134 - -
Prci1g1542 138 MobiDBLite consensus disorder prediction 45 73 - -
Prci1g1542 138 Gene3D - 1 60 - -
Prci1g1542 138 SUPERFAMILY AN1-like Zinc finger 64 133 IPR035896 -
Prci1g1542 138 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 136 - -
Prci1g1542 138 MobiDBLite consensus disorder prediction 45 67 - -
Prci1g1542 138 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 38 - -
Prci1g1542 138 SMART AN1_Zf_4 79 116 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1542 Prci-Chr1 34651624 34652106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1542 5 138 C2H2 Transcription Factor Family AT3G52800 39.103 3.15e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1542 - - pcin:129303887 286.189