Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1529 ATGGCCACCTCCAGGAGGCTTAGGGCATTCAAGCGATGGATGGCATCCCGGGGTTTTGAAGTCAGTGATGGCCTGGAGTTCGTAGACGATCCAGAAAATGGAATTGCGGTGAGAGCTTTGCGCCTATTGAAGGAAGGCGACGTTGTTGCCAGAATACCAAAGGATGCTTGCCTGACGGTTAAGACTAGTGGGGCGCGTCAAATGATTGAAGACGCTGATTTGGCTGGTAATCTGGGAGTAGCAGTGGCTCTGATGTATGAGAGAAGCTTGGGCGAGGAGTCACCCTGGACCGGCTACCTTCAGCTTTTGCCTCACCAAGAGTGCCTGCCATTAGTGTGGACTCTGAACGAAGTAAACGAGCTTTTGAGTGGAACTGAGCTACATAAGACAGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCGGTATTGGATTTTGCACCTTCAAAGCTTAACCCAAAATTTTTTGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTGTTGCTTCGCGATCTTTTGAGATAGATGATTACCATGGATTCGGCATGGTTCCCTTGGCAGACCTATTCAATCATAAAACAGATGCCGAGGATGTGCATTTCACTGCTGTATCGTCAAACTATGAATCTGACAATGATGTTGATGGAAATGAGTGTGTCACTGATGAAGAATTGGCTGAAAATTCTTCTATAGATGAGACTGAGTTGGGTACAGCTCTTATTGGGAAATGCAGTGGTAGCAACTTGGAGTCATCTTCAGTTGTGGGAGATGATCCTTCAATGTTGGAGATGATTATGATAAAAAATGTCAGCATTGGAGCTGAGGTATTCAACACTTATGGGTCAATGGGCAATGCTGCTTTACTTCATAGATATGGATTTACTGAGCAAGATAACTGCTATGATATTGTGAACATTGATTTGGAACTGGTGCTTCAGTGGTGTTCTTCTTTGTTTTCAGCTCGATATGCTCGAGCAAGAGTCTCTCTCTGGAGAAGGCTGGGCTATTCGGCATGTGTCAGCCAAAACTCAGAATATTTTGAGATATCATCTAATGGAGAACCACAGACTGAACTCCTGATGTTATTGTACATTATTTTATTATCAGAAGATGCACACCATAAGTTAGACATATCAGTGTCGATTGCAGGAAATATTCATGAATCAAGTGAAACTTCTCTTTCAGGAGACTGCAATATCTTGACAAAGAAAACATATGATATGAGTAGGAAATCCTTGCTGACTAGGAAAGTTTGTGGTGCTTTGTTGTCTGTTGCTGATATGCGTGAAAGTCTTTATGGTCTGAACTCAATAGAAGATGATATTGAGACATTAGGGAGGTGTGATTGTGTTAGAGAAAGAAAGTTGTTCCATTCTTTGGTGCTGCGCGTTGGTGAAAGGAAGATCCTTGAAAAGCTCAGAAATTTTGCCGCCCAGCCATTTAGAACTGGTAAACGAAATTCTGCAAGGAAGAAAATGAAAAGCAGAAGAAAGTAA 1515 0.4244 MATSRRLRAFKRWMASRGFEVSDGLEFVDDPENGIAVRALRLLKEGDVVARIPKDACLTVKTSGARQMIEDADLAGNLGVAVALMYERSLGEESPWTGYLQLLPHQECLPLVWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPVLDFAPSKLNPKFFGVEEYFAARSLVASRSFEIDDYHGFGMVPLADLFNHKTDAEDVHFTAVSSNYESDNDVDGNECVTDEELAENSSIDETELGTALIGKCSGSNLESSSVVGDDPSMLEMIMIKNVSIGAEVFNTYGSMGNAALLHRYGFTEQDNCYDIVNIDLELVLQWCSSLFSARYARARVSLWRRLGYSACVSQNSEYFEISSNGEPQTELLMLLYIILLSEDAHHKLDISVSIAGNIHESSETSLSGDCNILTKKTYDMSRKSLLTRKVCGALLSVADMRESLYGLNSIEDDIETLGRCDCVRERKLFHSLVLRVGERKILEKLRNFAAQPFRTGKRNSARKKMKSRRK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1529 504 ProSiteProfiles SET domain profile. 23 287 IPR001214 GO:0005515
Prci1g1529 504 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 412 - -
Prci1g1529 504 PIRSF RMS1_SET 1 486 IPR011383 GO:0016279|GO:0018026
Prci1g1529 504 SUPERFAMILY SET domain 4 305 IPR046341 -
Prci1g1529 504 CDD SET_LSMT 24 301 - -
Prci1g1529 504 Gene3D set domain protein methyltransferase, domain 1 3 300 - -
Prci1g1529 504 Pfam SET domain 34 287 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1529 Prci-Chr1 34552503 34560088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1529 1 499 NAC Transcription Factor Family AT3G56570 56.522 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g1529 SET 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1529 - K05302 vra:106769924 711.835