Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1525 ATGAGAGAGCCACAGACCTTCCTCTTATTCTTCTTCTTCCAACTCCTTTTCACCGTCCCAGTCACTTCATACAGTCCTGCTGAGCATTTCTCAGTCAACTGTGGTAGTTCCGTCGACGTTCTTGATAAAGATAAGCGGAATTGGACCGGAGATATTGTCTCCACTCAATTCTCTCTCATAGATCCCAACAAAGCCACCCAGCCCGTCAAAGCCGCCGAGGCACAAGTCAGCCCAAGAATCCCCTACGGCACTGCACGCCTCTCCCGCTCCGAATTCTCCTACTCGTTTCTGGTGACAGACGGCCAAAAGTATATTCGCCTCTACTTTTACCCATCTTCCTACGACCCCCACTTCCTTCGCTTCGATGCAATCTTCTCCGTCAAAGCAGGACCCCATACCCTTCTTAAGGACTTCAATGCTTCAGCTAACGCCGATGCTGGAGCTTCACTTCATGTTGCTGCTCCAGAAGGAGCCATTGTACGAGAATACGGCGTCAACGTTGACCCAGGTCAGGTGCTCATTATAACCTTCACACCAAGCCAATCTAACCCAAACGCCTATGCTTTTGTCAATGGGATCGAGGTCGTCTCTATGCCCACCTTCCTTTATTACACCAAACCTGACGACCTAGAGGCTATGAGCCTAGATGGAAGAAACACCCAGTTTCCGGTCTTGAACAGAAATGCTCTTGAGACTGTGTATAGAATCAACGTTGGCGGGAGTCAGATCCCTCCCATCAATGACACTGGCATGTTTAGATATTGGGACATGGATAACGACTATGTGGAGAAGGAGCGCCCACATAGTGTATCAGCAGATTTGGGTTTAAAGCTAGACTATAAAGGTTATCCAAATTATACCGCACCAGATGCAGTATACATGACTGCTCGAAACTATGGGATGAACCAGACGTCCAAATTTAATGTGACTTGGGAGTTTGAAGTGGATTCCAATTTTACTTATATGGTGAGATTGCATTTTTGTGAGTTTGACCAACATATTCAAAATGTTGCAGAGAGAGTTTTTCAGATCTTCATAGCTGATATTTTGGTGGAAGGTGTCGCCGATGTGATGATATGGAGTAACAGGCAGCTTCTGGTTCCTGTCCATAGGGATTACGCCATATCGATGAGAGGGCAAGGAAGCTTGAAGAAGCAGAACCTTTCAATCAAGTTGCAACCAAACCCGACTGCAAGCAGCGCTTACAGAGATGTCTTATTGAATGGTATTGAAATTCTGAAAATAAGTGACCCGGCCAGTGGCAATCTTGGAGGTCCCAATCCCAATCCGCGTCCTTCTCCCTTAACACCAAACTTGCCATCACCCAAGTCCTCCAATAAAACAAGGGTAATTTCCATTGTTGTTGGGGTAGCTTTGGGCTTCGTCGTGCTATCCGTTGTTGTTATGTTTATCATTCGGCAACGAACAACATCTTCAGCCAACGAAAGCAGTTCTTGGTGGGGAAAGAAATCAGTAGACTCATCAAAAAAGAACAAATCTCATGGTTCATCATTGCCGTCCGATTTGTGTCGTCGCTTTTCAATAGATAAGATAAAAGCAGCCACAAGTAACTTTGATGATATTTTCATTGTAGGCGTTGGAGGGTTTGGTAACGTCTATAAAGGCTACATTGATGACGGTACGGTCCCTGTCGCAATCAAACGGCTCAAGAAAGGTTCCCAACAAGGGCTCCATGAGTTTCAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACAATCATTTAGTGTCTCTCATCGGTTACTGCAATGACGGTAACGAGATGATCCTAGTCTACGAGTTCATGGCTCATGGGACCCTCCGTGATCATCTTTACGGTTCTGATAACCCTCCACTTTCCTGGAAGCAAAGGTTGGGGATGTGCCTAAGCGTCAAAGGAAGTGTTGGTTACTTGGATCCAGAATACTATAAGCGTCAAAGGTTGACTGAGAAGTCTGACGTTTACTCTTTCGGAGTTGTATTGCTAGAAGTATTATGTGGGAGGCCTCCTTTGGTACGTAACGTGGAGAAGCAAAAATCAAGTTTAGTGGAGTGGGTCCGAAAATGCCATCGCGAGGGTGTGATTCACCAAACTGTTGACCCTCTCCTGATAGAAAGTATCACACCAGAGTGCTTAAAAGCATTTAGCGACATGGCACTCCAATGTTTGGTGGAAGATGGGAACGAACGGCCTTCGATGAACGACGTTGTGTGGGGCCTAGAGTTTGCGCTGCAGCTTCAAGAAGGGACAGAGGAATTTGTGGGGCTTGATGTGGCCGTGATTGAAGGAAAGAGCGAGGAAAGAGCTCTGCTGAGAAAAGCGACAAATGTGGAAGAAAGTAAAGTAGGGTTCACGAGCAGTGATGAATTAAAAGGCAGCAAGTTGACTACTTCAAGTAGTGAAGGTCGGTCTTTAGTTTCTGGGTCGATCTACTCCGAACTGAGTCATCCAACAGTGCGATGA 2463 0.4604 MREPQTFLLFFFFQLLFTVPVTSYSPAEHFSVNCGSSVDVLDKDKRNWTGDIVSTQFSLIDPNKATQPVKAAEAQVSPRIPYGTARLSRSEFSYSFLVTDGQKYIRLYFYPSSYDPHFLRFDAIFSVKAGPHTLLKDFNASANADAGASLHVAAPEGAIVREYGVNVDPGQVLIITFTPSQSNPNAYAFVNGIEVVSMPTFLYYTKPDDLEAMSLDGRNTQFPVLNRNALETVYRINVGGSQIPPINDTGMFRYWDMDNDYVEKERPHSVSADLGLKLDYKGYPNYTAPDAVYMTARNYGMNQTSKFNVTWEFEVDSNFTYMVRLHFCEFDQHIQNVAERVFQIFIADILVEGVADVMIWSNRQLLVPVHRDYAISMRGQGSLKKQNLSIKLQPNPTASSAYRDVLLNGIEILKISDPASGNLGGPNPNPRPSPLTPNLPSPKSSNKTRVISIVVGVALGFVVLSVVVMFIIRQRTTSSANESSSWWGKKSVDSSKKNKSHGSSLPSDLCRRFSIDKIKAATSNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKKGSQQGLHEFQTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFMAHGTLRDHLYGSDNPPLSWKQRLGMCLXSVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLVRNVEKQKSSLVEWVRKCHREGVIHQTVDPLLIESITPECLKAFSDMALQCLVEDGNERPSMNDVVWGLEFALQLQEGTEEFVGLDVAVIEGKSEERALLRKATNVEESKVGFTSSDELKGSKLTTSSSEGRSLVSGSIYSELSHPTVR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1525 821 Gene3D - 29 199 - -
Prci1g1525 821 Gene3D - 228 416 - -
Prci1g1525 821 FunFam FERONIA receptor-like kinase 29 199 - -
Prci1g1525 821 Gene3D Phosphorylase Kinase; domain 1 485 601 - -
Prci1g1525 821 Pfam Protein tyrosine and serine/threonine kinase 531 634 IPR001245 GO:0004672|GO:0006468
Prci1g1525 821 Gene3D Transferase(Phosphotransferase) domain 1 627 754 - -
Prci1g1525 821 FunFam FERONIA receptor-like kinase 228 416 - -
Prci1g1525 821 SUPERFAMILY Protein kinase-like (PK-like) 498 742 IPR011009 -
Prci1g1525 821 MobiDBLite consensus disorder prediction 425 439 - -
Prci1g1525 821 ProSiteProfiles Protein kinase domain profile. 525 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1525 821 PANTHER OS03G0124300 PROTEIN-RELATED 7 488 IPR046957 GO:0004672
Prci1g1525 821 MobiDBLite consensus disorder prediction 419 443 - -
Prci1g1525 821 MobiDBLite consensus disorder prediction 483 503 - -
Prci1g1525 821 Pfam Malectin-like domain 32 414 IPR024788 -
Prci1g1525 821 FunFam Receptor-like protein kinase FERONIA 497 601 - -
Prci1g1525 821 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1525 Prci-Chr1 34440904 34443753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1525 632 821 Receptor kinase-like Gene Family AT3G51550 45.500 1.73e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1525 Malectin_like 1.7e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1525 - - pcin:129307905 1539.24