Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1515 ATGGCGAAACCAGAATCAATGAAAGTTCTTGAAGCTTGTCGGGTAGCTCCGGCTCCGCCGGCAACAACCACTTCCGCCGCCGCATCGGAAACCTCCCTACCGTTCACCTTTTTCGACGTACTTTGGCTGAGATTTCCCCCTGTTGAGCGTCTTTTCTTCTACGAATTCCCTCACCCACCTTCCTCCTTCTTCCATTCCCTTCTTCCAAAACTCAAACTTTCCCTGTCTCTCACTCTCCGCCACTTTCTTCCTCTCGCCGGCAACATTGTCTGGCCACCACCCTCCCCGAAACCCTTCATCCGCTATGTTCCCGGTGACGGCGTCTCACTCACCGTCGCCGAGTCCAACGCAGATTTCAACCTTCTCTCTGGTTCAGAGTTCCCAGAAGCCGAGGAAATCCGCCTGCTGGTACCGGACTTGACTGTTTCCGATGAAAAAGCTTCTCTCATGAGTCTGCAAATCACTTTGTTTCCGAACTCAGGATTCTCTATTGGAATCACCACCCACCATGCAACCATGGACGGCAAAACATCAACCTTGTTCCTAAAGTCATGGGCTTATCTCTGCTCTAATATCCGAGAATCGTCATCAGTTTTATCGTTACCGGAGAATCTGAGGCCATCGTTCGACAGGTCAGTGGTGAAAGATCCGTCAGGGATTGCTGAGAAATTCGCGAGTTTTTGGTTAAATCAAGGTGGACCAAACAACAAAAGCTTGATGTTATGGAACATGAAGAAAACGGATCAAGGGAAGCTAATAAGGGGGACATTCGAATTGCTTCCTTCGAATATTCAAAAGCTTAAGAAATCTGCGGAGTCAAAGCTGAACAACAAGGCAATTCATCTATCAACCTTCTCAATAACAAGTGCCTATTTGTTGAACTGCTTGGTCAAAGCAGAACAAACAAAACACGATAAAGTGTTGTTCATATTCAGTGCGGATTGTAGATCTCGTTTGGATCCTCCAATTCCATCTGCATATTTTGGAAACTGCATTGGTGGGGCTAAGGCTGAGGCTGAGACCAAGAACTTGCTAGGGGATGATGGGTTCATTGTTGCACTTGAGGCCATAAGTGAAGCTTTGAAGAGATTGGAAAGTGAAGAAATATTAAGTTTAGCGGAAACATGGATATCTGATATGGAAACTTTTGGACTGACTGATACTTACAGAATGTTTTCAACAGCAGGATCACCACGATTTCAAGTTTATAGTAATGATTTTGGATGGGGAAGACCGAAGAAGGTGGAGATAGTTTCTATAGACAGGACAGGAGCTTTTTCTCTTGCAGAAAGCAGTAATGGAGGTATTGAGATTGGGTTGGTGATGAACAGAACTCAAATGGAAGCTTTTTCTGCTATTTTTCTCAAAGGTCTTTCTTCCTGA 1383 0.4526 MAKPESMKVLEACRVAPAPPATTTSAAASETSLPFTFFDVLWLRFPPVERLFFYEFPHPPSSFFHSLLPKLKLSLSLTLRHFLPLAGNIVWPPPSPKPFIRYVPGDGVSLTVAESNADFNLLSGSEFPEAEEIRLLVPDLTVSDEKASLMSLQITLFPNSGFSIGITTHHATMDGKTSTLFLKSWAYLCSNIRESSSVLSLPENLRPSFDRSVVKDPSGIAEKFASFWLNQGGPNNKSLMLWNMKKTDQGKLIRGTFELLPSNIQKLKKSAESKLNNKAIHLSTFSITSAYLLNCLVKAEQTKHDKVLFIFSADCRSRLDPPIPSAYFGNCIGGAKAEAETKNLLGDDGFIVALEAISEALKRLESEEILSLAETWISDMETFGLTDTYRMFSTAGSPRFQVYSNDFGWGRPKKVEIVSIDRTGAFSLAESSNGGIEIGLVMNRTQMEAFSAIFLKGLSS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1515 460 Gene3D - 6 238 IPR023213 -
Prci1g1515 460 Gene3D - 250 460 IPR023213 -
Prci1g1515 460 SUPERFAMILY CoA-dependent acyltransferases 278 456 - -
Prci1g1515 460 Pfam Transferase family 29 451 - -
Prci1g1515 460 PANTHER - 7 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1515 Prci-Chr1 34205172 34206757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1515 51 456 Monolignol Biosynthesis Gene Families AT5G48930 24.641 1.33e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1515 - - gmx:100800849 470.7