Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1501 ATGGCTTCTCTTGTGGTGTCTGAGATGCTTGGAAACCCTCTTACCTTCAATGGCGCCACCAGGTCGGCGCCGCCACCGTCGCCGTCCAGTCCCGCCACCTTCAAGACCGTCGCTCTTTTCTCTAGGAAGAAGGCAGCCCCTCCTCCTTCCAAGGCAAAGCCTGCCGCCGTCTCTCCGGCCAACGATGAACTCGCCAAGTGGTACGGTCCTGACAGAAGAATCTTCTTGCCGGAGGGTCTGTTAGACAGATCTGAGATCCCGGCGTACTTGACCGGAGAGGTTCCCGGAGACTATGGTTATGACCCCTTTGGTCTCAGCAAGAAACCAGAGGACTTTGCCAAATATCAGGCATATGAATTGATCCATGCCAGATGGGCTATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAGTTTGGAGCAAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTCTGCTTCTTGATGGCAACACATTGAACTACTTCGGAAAGCCCATCCCTATCAACCTTATAGCTGCTGTCATTGCAGAGATTGTTCTTGTGGGTGGTGCAGAGTACTACAGGATTATTAATGGCCTTGATTTGGAGGACAAGCTTCATCCGGGCGGTCCATTCGACCCACTGGGGCTAGCAAAGGACCCGGACCAAGCAGCACTGCTAAAAGTGAAGGAGATAAAGAATGGAAGGCTTGCCATGTTTGCAATGCTAGGGTTCTACTTCCAAGCATACATAACAGGAGAAGGTCCAGTTGAGAACCTTGCCAAACATCTCAGCGATCCTTTTGGCAACAATTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGAGCTCCTACTCTGTGA 858 0.5163 MASLVVSEMLGNPLTFNGATRSAPPPSPSSPATFKTVALFSRKKAAPPPSKAKPAAVSPANDELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKPIPINLIAAVIAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYITGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1501 285 Gene3D Chlorophyll a/b binding protein domain 74 285 - -
Prci1g1501 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 274 IPR001344 GO:0009765|GO:0016020
Prci1g1501 285 Pfam Chlorophyll A-B binding protein 87 248 IPR022796 -
Prci1g1501 285 FunFam Chlorophyll a-b binding protein, chloroplastic 74 285 - -
Prci1g1501 285 SUPERFAMILY Chlorophyll a-b binding protein 66 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1501 Prci-Chr1 33872883 33875412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1501 1 285 Chloroplast and Mitochondria Gene Families AT4G10340 82.105 2.77e-154 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1501 K08916 - cpap:110818730 522.316