Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1500 ATGGGTTTTCCGGCCCTTCTTCTCTCCTCTCTCCTGTTCTCTCTGTCTCTCCCAACTTGGGTCTGTGGGAATGCAGAGCTCAGAGTTCTCATGGACGTGAAAGCTGCTCTTGACCCAGAAAGCCGTTATCTTTCTTCTTGGACTTCTAATGGGAACCCATGTGATGGTTCTTTCGAAGGAGTGGCTTGCAACGAGAAGGGTCAAGTGGCTAACATTTCCTTGCAGGGGAAGGGCCTCTCAGGGAAGCTCTCGTCCGCCATTGATGGCCTTAAGCACTTGACTGGCCTATACTTGCATTATAACGCTCTCTATGGTGAGATACCCAAAGAAATCGCCAACTTGGCCGAGCTCACTGATTTGTATTTGAATGTCAATCACTTCACTGGGGAAATCCCTCTTGAGATCGGCAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAATTGAAGGGAAGTATTCCAACTCAACTTGGTGGTTTGAAGAAGCTTAGTGTTCTCGCTCTGCAGTCAAATCAATTAACTGGTGCTATCCCTGCAAGTTTAGGCGACTTGGAAGTTTTAATGAGGCTCGACTTGAGCTCTAACCGCCTATTCGGTTCCATTCCCTCTAAATTAGCCGATGCCTCTTCTCTGCAAGTTCTAGATGTTCGCAATAACACTCTCTCTGGGAATGTACCATCTGCTCTGAAGAGACTTGAAGATGGATTTTTGTATGAATACAATCTGGGATTGTGTGGAGCTGGGTTTTCATCCTTGAAGACTTGCAGTGCTTCTGATCATGTTGATCGAAGCAGGCCTGAACCCTTTGGAGCTGGTGTTCATGGTCTATCATCAACGAGGGACATTCCAGAAACTGCAAATGTTCAGCTTCCCTGCAATGGAAATCAGTGCCAAAACTCATCAAAATCGAAACAAACAGCAACAACATCTGTTACTGTTGGCATAGTTGTGATTGCTATAGCAGTGTCAGCAGTTGGCATTCTAACCTTTGTTCATTATCGCCGAAGGAAACAGAAGCTCGGAAACTCCTATGATGTCTCTGATAGCCGCCTAAGTACTGATCAAGCTAAACCTGTCATATACAGGAAAAATGGCTCTCCTCTGATCAGCCTTGAGTATTCCAATGGATGGGACCCTTTAGCTGATAGCCGGAACTTCAACGGAGACAGTCAAGACATGTTCCAAAGTTTCCGGTTCAACTTGGAAGAGGTCGAAACGGCAACTCAGTATTTCTCGGACTCGAATCTGTTAGGGAAGAGCAACTTCAGTGCAACATATAAAGGAGTGTTGAGGGATGGGTCTGTAGTTGCTGTGAAGAGCATCAGCAAAAGTAGTTGCAAGTCAGATGAAGCTGAGTTTTTGAAGGGACTGAACATTTTGACATCATTGAGGAATGAGAATCTAGTGAGGCTCAGAGGTTTTTGTTGTTCCAGGGGACGAGGAGAGTGCTTTCTGGTTTATGATTTTGTTCCTAATGGAAATCTGTCACGCTACCTTGATGTCAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACCAGAGTTTCCATTGTCAAAGGGATTGCTAAAGGTATTGCATATTTACACGCACACAAAGCGAACAAACCTGCACTTGTTCACCAAAACATCTCGGCTGAGAAAGTGCTCATTGATCAGCGATTCAATCCATTGCTTTTGGATTCTGGTCTCTGCAAGGTCCTCACCAATGACATCGTCTTCTCGGCACTCAAGGCCAGCGCGGCGAAGGGCTATCTAGCTCCGGAGTACACCACCACCGGCCGGTTCACCGAGAAAAGTGACGTGTATGCTTTTGGATTGGTGGTTTTGCAGATCCTCTCAGGGAAGCAGAAGATCACGAGCACAATGCGCCTCTTGGCAGAATCTTCGAGGTTCCTGGAAGTTATGGACCCGAATCTTCATGGCAAGTTCTTCGAATTCGAGGCAGCTAAGCTGTTGAAGATGGGTCTGGTTTGTTCACACGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTGAGCAATTGTAGTAGCTGTCTGTGA 2058 0.4602 MGFPALLLSSLLFSLSLPTWVCGNAELRVLMDVKAALDPESRYLSSWTSNGNPCDGSFEGVACNEKGQVANISLQGKGLSGKLSSAIDGLKHLTGLYLHYNALYGEIPKEIANLAELTDLYLNVNHFTGEIPLEIGKMENLQVLQLCYNQLKGSIPTQLGGLKKLSVLALQSNQLTGAIPASLGDLEVLMRLDLSSNRLFGSIPSKLADASSLQVLDVRNNTLSGNVPSALKRLEDGFLYEYNLGLCGAGFSSLKTCSASDHVDRSRPEPFGAGVHGLSSTRDIPETANVQLPCNGNQCQNSSKSKQTATTSVTVGIVVIAIAVSAVGILTFVHYRRRKQKLGNSYDVSDSRLSTDQAKPVIYRKNGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVETATQYFSDSNLLGKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAHKANKPALVHQNISAEKVLIDQRFNPLLLDSGLCKVLTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGLVVLQILSGKQKITSTMRLLAESSRFLEVMDPNLHGKFFEFEAAKLLKMGLVCSHESPFERPSMEAIVQELSNCSSCL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1500 685 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Prci1g1500 685 Gene3D Ribonuclease Inhibitor 23 173 IPR032675 -
Prci1g1500 685 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Prci1g1500 685 SUPERFAMILY L domain-like 22 233 - -
Prci1g1500 685 Gene3D Transferase(Phosphotransferase) domain 1 492 684 - -
Prci1g1500 685 FunFam Protein NSP-INTERACTING KINASE 2 492 682 - -
Prci1g1500 685 FunFam Protein NSP-INTERACTING KINASE 2 384 491 - -
Prci1g1500 685 FunFam Protein NSP-INTERACTING KINASE 2 136 258 - -
Prci1g1500 685 ProSiteProfiles Protein kinase domain profile. 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1500 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 680 IPR046959 -
Prci1g1500 685 Pfam Protein tyrosine and serine/threonine kinase 417 678 IPR001245 GO:0004672|GO:0006468
Prci1g1500 685 FunFam Leucine-rich repeat receptor-like kinase 25 134 - -
Prci1g1500 685 Gene3D Ribonuclease Inhibitor 174 237 IPR032675 -
Prci1g1500 685 Gene3D Phosphorylase Kinase; domain 1 383 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1500 Prci-Chr1 33848763 33852991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1500 5 526 Miscellaneous Gene Families AT4G22730 55.367 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Prci1g1500 PK_Tyr_Ser-Thr 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1500 - - gmx:100789253 1083.94