Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1469 ATGGTGGATGATGGTGCACCGGTGTTGTTGCTATTTCGTACCGGCAAGCATGCGAAGGAGGTCAAGATGCTGTTATTTATGGCGCTGCTGTTGTTTCTCTTTTCATTTGCTTCACCTCTCGGTGACGAAGGACAAACATTAATGACTATCAAGGCTTCTTTCAGCAACGAAGCAAATGAGTTGCTTGATTGGGACGATGTGCACAATGACGACTTTTGTTCTTGGCTCGGAGTATACTGTGATAACACCAGCATTACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGTGGCGAAATATCACCAGCCATCGGTGAATTGAGAAACTTGCAATCCATAGATCTCCAGGGGAATAAACTAAGTGGTCAAATTCCAGATGAAATTGGGAACTGTGCCTCGCTTGTCCATTTAGATTTGTCTGATAACCAGTTGTATGGGGACGTGCCTTTCTCCCTATCAAAGCTAAAGCAGTTGGAGTTTCTGAATTTGAAGAATAATCAGTTGACTGGTCCTATCCCTTCAACATTAACCCAAATTCCTAACCTGAAAACGCTTGATCTTGCTCGAAACCGCCTCACTGGTGAGATACCAAGACTGCTCTATTGGAATGAAGTTCTGCAGTATCTGGGTTTACGAGGGAACAATCTGACTGGAACTTTGTCCTCCGACATTTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTAACGGGCACAATACCTGAAAGCATTGGAAACTGTACAAATTTTGAAATTTTGGATTTATCATATAATCAGATCAGTGGGAAAATTCCTTACAATATTGGATTCCTGCAAGTTGCAACCTTGTCTCTTCAAGGTAATAGGCTAACTGGGAAAATTCCAGAGGTGATCGGTCTGATGCAAGCACTTGCTATTTTGGATTTGAGTGAGAATGAGCTGGAGGGACCTGTCCCTCCAATATTTGGCAATTTATCTTTTACTGGGAAGCTGTACCTCCATGGAAACAAACTTTCTGGTCCTATACCACCAGAACTTGGCAATATGTCTAAATTAAGCTACCTGCAATTAAATGACAACCGATTAGTTGGCAAAATTCCTGAAGAGCTTGGAAAGCTTGAACATTTGTTTGAATTGAATCTTGCCAACAATAATCTTGAGGGATCTATTCCACATAACATCAGCTCCTGCACGGCCTTGAATCAGTTCAATGTGCACGGTAATCACTTGAGTGGATCCATTCCTGGGAGTTTTAGAACCCTTCAGAGTTTGACTTACCTAAATCTTTCTGCTAACAACTTCAAAGGGAGCATACCTGTTGAGCTGGGCTATATCATAAATCTTGATACGCTGGATCTGTCAAGAAATAATTTTTCAGGTCCAGTTCCACCATCTGTTGGTGACTTGGAGCATCTCCTGACCTTGAACCTGAGCCATAACCTTCTTGATGGTCCATTACCTGCTGAATTTCGGAATATGAGAAGCATACAGATTATTGATATTTCATACAACAGTCTTTCGGGTAGTATCCCTGGGGAAATTGGTCAACTGCAGAACCTTGTGTCTCTGATACTGAACAACAATGATTTGCACGGGATAATTCCAGATCAGCTAGCTAATTGCCTGAGTCTCTCCACCTTAAATGTCTCATACAATAATTTATCTGGAACTATTCCTCCTATGTGGAATTTTTCACGTTTTTCATCTGACAGTTTCATTGGAAATCCGTTATTATGTGGAAAAAAGTTAGGTTCATTATGTGGTCCTTACATGCCGAAATCCAGAGCAATTTTTTCAAGGGCTGCAGTTCTTTGTCTAGCACTGGGTATCATCACAATATTGGTAATGGTCATTATTGCTATTTATAGAACCATACAGTCGAAGCATTTGATGAAAGGATCGGGCAGATCTGGACAAGGTCCTCCCAAACTTGTAATTCTTCATATGGATATGGCACTTCATACCTTGAATGATGTAATGAGAGCTACTGAGAATCTCAGTGAGAAATATATCATAGGTTATGGTGCCTCTAGTACAGTATACAAATGTAATTTAAAAGGTTCCCGGCCAATTGCAATTAAGCGACTTTACAACCAGCATCCACACAATTTGAAAGAGTTTGAAACAGAACTTGAGACTGTTGGTAGCATCAGACATAGAAACCTTGTCACCTTGCATGGCTATGCACTGACCCCCTATGGAAATCTCCTGTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTTCCTTGAAGAAGATGAAGCTTGACTGGGAAACACGATTGAGGATTGCTGTTGGCGCTGCCGAAGGACTTGCTTATCTCCATCATGATTGCAACCCTCGGATTATTCACAGGGATATAAAATCCTCTAATATTTTACTGGACAAGAACTTTGAACCTCATCTTTCTGATTTTGGTACTGCAAAAAGCATATCAACAACAAGAACTCATGCATCAACTTTTGTCCTTGGAACCATAGGGTATATTGATCCCGAGTATGCCCAGACTTCTCGGTTGAATGAAAAATCAGATGTTTACAGCTTTGGCATCGTTCTGTTAGAGCTACTAACTGGGAAGAAAGCAGTAGATAATGAGTCTAACTTGCTACAATTGATACTATCCAGGGCAGATAACAACACTGTAATGGAAGCTGTAGATCCAGAGGTCTCTGTGACCTGCTTGGATTTGGCCCGTGTGAAGAAGACCTTTCAGCTTGCACTACTATGCACCAAAAGAAACCCTTCTGAGAGGCCTACCATGCACGAGGTTGCAAGGGTATTGGCGTCTCTACTGCCTGCGCCGCCTAATAAGGCGTTTACTACACCGGCAAAGATGGCTGATTATGCACAAGTGTTGATAGAAAAGGGACAATGTCAAATGATGGGGTTGGCGCAACCTAAGAAGGAGGATAATTCTTCTGATGCTCATTGGTATGTTAGCTTTGGAGATGTATGCAAGAACACCCCCTAA 2979 0.4156 MVDDGAPVLLLFRTGKHAKEVKMLLFMALLLFLFSFASPLGDEGQTLMTIKASFSNEANELLDWDDVHNDDFCSWLGVYCDNTSITVLTLNLSSLNLGGEISPAIGELRNLQSIDLQGNKLSGQIPDEIGNCASLVHLDLSDNQLYGDVPFSLSKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNNLTGTLSSDICQLTGLWYFDVRGNNLTGTIPESIGNCTNFEILDLSYNQISGKIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELEGPVPPIFGNLSFTGKLYLHGNKLSGPIPPELGNMSKLSYLQLNDNRLVGKIPEELGKLEHLFELNLANNNLEGSIPHNISSCTALNQFNVHGNHLSGSIPGSFRTLQSLTYLNLSANNFKGSIPVELGYIINLDTLDLSRNNFSGPVPPSVGDLEHLLTLNLSHNLLDGPLPAEFRNMRSIQIIDISYNSLSGSIPGEIGQLQNLVSLILNNNDLHGIIPDQLANCLSLSTLNVSYNNLSGTIPPMWNFSRFSSDSFIGNPLLCGKKLGSLCGPYMPKSRAIFSRAAVLCLALGIITILVMVIIAIYRTIQSKHLMKGSGRSGQGPPKLVILHMDMALHTLNDVMRATENLSEKYIIGYGASSTVYKCNLKGSRPIAIKRLYNQHPHNLKEFETELETVGSIRHRNLVTLHGYALTPYGNLLFYDYMENGSLWDLLHGSLKKMKLDWETRLRIAVGAAEGLAYLHHDCNPRIIHRDIKSSNILLDKNFEPHLSDFGTAKSISTTRTHASTFVLGTIGYIDPEYAQTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLLQLILSRADNNTVMEAVDPEVSVTCLDLARVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPAPPNKAFTTPAKMADYAQVLIEKGQCQMMGLAQPKKEDNSSDAHWYVSFGDVCKNTP 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1469 992 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
Prci1g1469 992 SMART LRR_typ_2 419 443 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 467 490 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 371 395 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 515 538 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 108 132 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 228 252 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 156 179 IPR003591 -
Prci1g1469 992 SMART LRR_typ_2 180 204 IPR003591 -
Prci1g1469 992 Gene3D Ribonuclease Inhibitor 205 315 IPR032675 -
Prci1g1469 992 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 40 204 - -
Prci1g1469 992 SMART serkin_6 664 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1469 992 Pfam Leucine Rich repeat 251 268 IPR001611 GO:0005515
Prci1g1469 992 Pfam Leucine Rich repeat 181 196 IPR001611 GO:0005515
Prci1g1469 992 Gene3D Ribonuclease Inhibitor 41 204 IPR032675 -
Prci1g1469 992 Gene3D Phosphorylase Kinase; domain 1 635 739 - -
Prci1g1469 992 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Prci1g1469 992 SUPERFAMILY L domain-like 319 581 - -
Prci1g1469 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 179 932 - -
Prci1g1469 992 ProSiteProfiles Protein kinase domain profile. 664 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1469 992 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 315 588 - -
Prci1g1469 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Prci1g1469 992 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 740 941 - -
Prci1g1469 992 SUPERFAMILY L domain-like 43 324 - -
Prci1g1469 992 Pfam Leucine rich repeat 109 169 IPR001611 GO:0005515
Prci1g1469 992 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Prci1g1469 992 Gene3D Ribonuclease Inhibitor 316 587 IPR032675 -
Prci1g1469 992 Gene3D Transferase(Phosphotransferase) domain 1 740 944 - -
Prci1g1469 992 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 205 314 - -
Prci1g1469 992 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 635 739 - -
Prci1g1469 992 SUPERFAMILY Protein kinase-like (PK-like) 641 930 IPR011009 -
Prci1g1469 992 Pfam Leucine rich repeat N-terminal domain 41 81 IPR013210 -
Prci1g1469 992 Pfam Protein kinase domain 667 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1469 Prci-Chr1 33415649 33422792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1469 110 991 Receptor kinase-like Gene Family AT5G07180 75.282 0.0 1338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Prci1g1469 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1469 K20718 - qsu:111992965 1547.72