Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1468 ATGCCTTCTCTACCTGTCTCTGATGTTATTCTCTCTGAGACTCCCAAAGATAAAAAGGAGAAGAAGAAGAAGATAAAGAACGAGGCTCCAATTGAAGATGGGGTTACGGTGAAGAAGAAGAAGGAGAGCAAGAAGCGTAAAGCTTTGGATGCTGAGAAGATGGCGAGTGAGGATGATGTAAAGAGTGAGACGAGTTCTGAGTTGGTTGAGCCTGATAGTGTGAAATCTAAGAGTGAGGAGAAGAGGAAGAAGAAAAAGGCTAAGTTGGACGAGCCTGAAGTTCAAGGGGAAGAGGTTGAGAAGGAGAATCCTAATGCAATTTCGAACTTTAGGATATCGGCGCCGTTGAGGGCCAAGTTGAAAGAGAAGGGGATTGAATCGTTATTTCCCATCCAGGCGATGACTTTTGATACCATCCTAGACGGCTCTGATCTGGTTGGTCGAGCTCGCACTGGGCAGGGTAAGACTCTTGCCTTTGTGCTACCCATATTAGAGTCTTTAATAAATGGTCCTGCAAAAGCAGCCAGAAAGACTGGATATGGAAGCGCTCCTTGTGTTCTTGTGCTCTTACCTACTAGAGAATTGGCCAACCAGGTGTTTGCTGATTTTGAAGTTTATGGTGGGGCACTGGGATTGGCCTCTTGTGTTTTATATGGTGGAGCTCCATATCAAGCACAAGAATTTAAACTCAAGAGGGGTGTTGATATTGTTGTTGGAACTCCAGGACGCATAAAAGATCATTTAGAGAGGAAAAATCTTGACCTGAGCCAACTAAGGTTCCGTGTACTGGATGAAGCGGATGAGATGCTGAGGATGGGTTTCGTTGAAGATGTTGAACTCATTTTGGGTAAAGTAGAGGATGTTAGTAAAGTTCAGACACTTCTTTTCAGTGCTACTTTGCCAGACTGGGTTAAGAGTATTTCTATGAAATTTCTGAAATCTAACAAAAAAACTGCTGACCTGGTGGGCAATGAGAAAATGAAAGCTAGCATTAATGTTAGGCATATTGTTCTCCCATGTTCTAGTTCTGCCAGGTCCCAACTTATTCCAGATGTTATACGTTGCTATTGCAATGGAGGTCGGACAATTATATTTACTGAGACAAAGGAGTCTGCTTCTGAGCTTGCAGGGCTGTTGCCTGGTGCACGAGCTCTGCATGGTGATATACAGCAGTCACAACGTGAGGTCACCTTAGCTGGTTTCAGGGCTGGGAAGTTTACAACATTAGTGGCCACTAATGTGGCAGCCCGTGGTTTGGACATTAATGATGTTCAGTTAATTATCCAGTGTGAACCCCCACGTGATGTAGAAGACTATATCCATCGATCTGGGCGCACTGGAAGAGCAGGTAATACTGGAGTTGCTGTGATGCTTTATGATCCAAGAAGGTCAAATATATCAAAAATAGAAAGAGCATCTGGTGTGAAATTTGAACACATATCTGCTCCTCAGCCTGCTGATATTGCCAAAGCTGCTGGTGGGAATGCTGCTAAATTGATAACCCAGGTGTCTGATAGTGTCATCCCTGCTTTCAAATCTGCTGCGGAGGATCTTTTAAACAATTCAGGCTTAACAGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGACTATTGGTTATACTGACATAAAGAAAAGATCACTACTCACTTCCATGGAGAACCATGTCACGTTACTTCTTGAGATTGGCAGACCCATCTATTCCCCTTCATTTGCATTTGGAATCTTGAGGAGATTCTTGCCTCAGGAGAAGGTTGACTCAATCAAGGGTCTTACTCTCACTGCAGATGGAAATGGTGCTGTTTTTGATGTGTCAGCTGAAGACTTAGATACCTTTCTGAATGGTCAGGAAAATGCTGCTAACGTTAGTTTAGAAGTATTGGAGGCATTGCCAAGTTTGCAAGAAAGAGAACAATCAAGAGGTAGATTTGGTGGTGGTCGAGGCGGTGGCGGCAATAGGTTTTCTGGTGGAAGGGGTGGCGGCAGATTTTCTAATGACAGAAATGGTAGGTTTTCCAATAATTCTAGAAGTGGGAGAGGTAGGGGCAACAATGGGGCAAAGAGGTGGTGA 2070 0.4386 MPSLPVSDVILSETPKDKKEKKKKIKNEAPIEDGVTVKKKKESKKRKALDAEKMASEDDVKSETSSELVEPDSVKSKSEEKRKKKKAKLDEPEVQGEEVEKENPNAISNFRISAPLRAKLKEKGIESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPAKAARKTGYGSAPCVLVLLPTRELANQVFADFEVYGGALGLASCVLYGGAPYQAQEFKLKRGVDIVVGTPGRIKDHLERKNLDLSQLRFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATLPDWVKSISMKFLKSNKKTADLVGNEKMKASINVRHIVLPCSSSARSQLIPDVIRCYCNGGRTIIFTETKESASELAGLLPGARALHGDIQQSQREVTLAGFRAGKFTTLVATNVAARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERASGVKFEHISAPQPADIAKAAGGNAAKLITQVSDSVIPAFKSAAEDLLNNSGLTAVELLAKALAKTIGYTDIKKRSLLTSMENHVTLLLEIGRPIYSPSFAFGILRRFLPQEKVDSIKGLTLTADGNGAVFDVSAEDLDTFLNGQENAANVSLEVLEALPSLQEREQSRGRFGGGRGGGGNRFSGGRGGGRFSNDRNGRFSNNSRSGRGRGNNGAKRW 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1468 689 MobiDBLite consensus disorder prediction 636 689 - -
Prci1g1468 689 Gene3D - 558 628 - -
Prci1g1468 689 SMART ultradead3 124 336 IPR014001 -
Prci1g1468 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 462 IPR027417 -
Prci1g1468 689 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 348 489 IPR001650 -
Prci1g1468 689 Pfam GUCT (NUC152) domain 539 634 IPR012562 GO:0003723|GO:0004386|GO:0005524
Prci1g1468 689 SMART helicmild6 373 450 IPR001650 -
Prci1g1468 689 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 136 318 IPR014001 -
Prci1g1468 689 Pfam Helicase conserved C-terminal domain 358 450 IPR001650 -
Prci1g1468 689 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 262 270 IPR000629 -
Prci1g1468 689 FunFam DEAD-box ATP-dependent RNA helicase 7 556 628 - -
Prci1g1468 689 SUPERFAMILY RNA-binding domain, RBD 543 626 IPR035979 GO:0003676
Prci1g1468 689 CDD DEADc 116 313 - -
Prci1g1468 689 Gene3D - 330 557 IPR027417 -
Prci1g1468 689 MobiDBLite consensus disorder prediction 12 100 - -
Prci1g1468 689 Gene3D - 50 318 IPR027417 -
Prci1g1468 689 MobiDBLite consensus disorder prediction 1 102 - -
Prci1g1468 689 CDD GUCT_RH7_like 546 631 - -
Prci1g1468 689 Pfam DEAD/DEAH box helicase 129 306 IPR011545 GO:0003676|GO:0005524
Prci1g1468 689 CDD SF2_C_DEAD 333 459 - -
Prci1g1468 689 MobiDBLite consensus disorder prediction 666 681 - -
Prci1g1468 689 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 28 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1468 Prci-Chr1 33389668 33394595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1468 95 489 Eukaryotic Initiation Factors Gene Family AT1G72730 29.455 4.55e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1468 K16911 - qsa:O6P43_005503 973.77