Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1456 ATGCTCTCTCGAAAATTCTCTGCCTCGCCGTCGTCCGCGGTTGTTTCTGATCCATATCCATCTTCTCTTTCTCCAAATCAGTCTCATCCCTCTCACAAAAGCCACCATCTTTTGCCTCCGCTTGTTGCTTCCGCTGCCTCTGTATGCTCCATCTTCTTTCTCTTTTTCCTCTGTTTTCGTAGACTTGCGAGAAAACGCACCGCCCCTTCTTCTGATTCTGAGTCTAAGCCTCCGTATCGTTTCTCGTATTCCCTCCTCCGCCGTGCCACGTCATCCTTTTCCACCCGCCTCGGCCAAGGCGGCTTCGGCCCCGTCTACTCCGGCACTCTGCCTCCTACTCGACAACCCGTCGCCGTCAAGCTCATGGACTCTGCCTCTCTTCAGGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCCTCCAGGCTTCACTCTCAGCACGTAGTCTCTGCCATCGGCTTTTGCTCTGACAGGAATCGCCGGAGGTTCTTGCTCGTCTACGAGTTGATGCACAATGGGAATCTCCAGGACGCGCTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCGTCGACATAGCCAAAGGGATTCAGTACCTTCACTCTTGCGACCCTCCCGTGATTCACGGCGATATCAAGCCAAGTAATATTCTATTAGACCGTTCTATATCGGCGAAAATTGGGGATTTCGGCCTTGCACGATTGAAATCGGAACCCCAGATTGAAATTGGGATTCTGAACTTGGACGGTGTTGAAAAGAAGAGTGGTGGATTGGACTTGGAAGACGAGAAGAAGGCAAAGGAAGAAGAGTTAGAGAGTAATGGCGGGTCATTGGTCGAAGAAACACAGAGCGTGAATACCGTTGATGAAGGTAGCTTAGGCGCGGAGCAATCCCCCGAGGGTTTTGTCACGATACCCATATCGGAGCCATCGCCGGGGCCGTTGGAGGCGGCGGCGGCGATGGCAGCGTCACCGTCGGAGGCGAATTTCGAAAAAGTTAGCTTTCAGAGTGAGAAAAACATTTCCTTGAGTTCTAAGAAAAACGGGAAAGTCTTAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAACAAGATATCGAATCAGCAGCAGCATCCTCCATGGCTGAGAGTAAGAAAGTGAAGGATTATGTAATGGATTGGCTTGGAAAAGAAATAAACAAAGAAAGACCCAAGGGCGAATGGGTAGCATCAGCAGCAGAAACAGCTACCTCAAGTAGCGGGGCAACAATGGGAAAACCAGAGAAAAAGAAGAGCAAGAGGCGCTTGGAATGGTGGAGATCAATGGAGGAGGAAACCATTAATCCTAAAGCTTTAAAGAAGGAGAAGAGAAGACCGGCGAGAGAATGGTGGAAGGAAGAGTACTGTGAAGAGCTCGCCAAGAAGAAGAAGAAAAAGAAGAAACAGCAGCAAAAGAGAAGTGGAATAAACAGTGACGATGATTGGTGGGCAAGAGACGACGAAGACATATTTGGTGAAAGAAAGAAGGCCAAAACCCGTAAAAACAGTCTTGGTAGTATAGATTGGTGGTTAGATGGATTTAGTGGTGACCTATTCAGAGCTCGCAGAAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGCGGTGGTGTTAGTAGCACACCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTACGGTGAAGATTTATCAGAGAAGTGTGATGTATATAGTTTTGGGGTTCTATTACTTGTTATAGTTTCTGGACGACGTCCACTTCAGGTTACTGGTTCACCATTATCAGAGTTTCATAAAGCAAATCTACTGTCATGGGCACGCCTTTGTGCACGCAGTGGGAAGCTGCTCGATCTGGTTGATCAGTCTATTAAGTCATTAGATAAAGATCAAGCTCTTCTCTGCATCACAATTGCTCTTCTTTGTCTGCTCAAGACACCTTCTCGTCGTCCTTCAATGAAAGAGGTTGTGGGAATGCTTAGTGGTGAACTGGATCCACCACAATTGCCGGTTGAGTATTCACCGTCGACGCCATCTCGCTTCCGAAGCAAGTCACGGAAAAAGGGTCCGTGA 2106 0.4848 MLSRKFSASPSSAVVSDPYPSSLSPNQSHPSHKSHHLLPPLVASAASVCSIFFLFFLCFRRLARKRTAPSSDSESKPPYRFSYSLLRRATSSFSTRLGQGGFGPVYSGTLPPTRQPVAVKLMDSASLQGEREFHNELFFASRLHSQHVVSAIGFCSDRNRRRFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSVIVDIAKGIQYLHSCDPPVIHGDIKPSNILLDRSISAKIGDFGLARLKSEPQIEIGILNLDGVEKKSGGLDLEDEKKAKEEELESNGGSLVEETQSVNTVDEGSLGAEQSPEGFVTIPISEPSPGPLEAAAAMAASPSEANFEKVSFQSEKNISLSSKKNGKVLKSNSMKDWWWKQDIESAAASSMAESKKVKDYVMDWLGKEINKERPKGEWVASAAETATSSSGATMGKPEKKKSKRRLEWWRSMEEETINPKALKKEKRRPAREWWKEEYCEELAKKKKKKKKQQQKRSGINSDDDWWARDDEDIFGERKKAKTRKNSLGSIDWWLDGFSGDLFRARRNSHDSAASWEIPKSGGVSSTPSMRGTVCYVAPEYGYGEDLSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHKANLLSWARLCARSGKLLDLVDQSIKSLDKDQALLCITIALLCLLKTPSRRPSMKEVVGMLSGELDPPQLPVEYSPSTPSRFRSKSRKKGP 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1456 701 Gene3D Phosphorylase Kinase; domain 1 79 169 - -
Prci1g1456 701 MobiDBLite consensus disorder prediction 406 434 - -
Prci1g1456 701 SUPERFAMILY Protein kinase-like (PK-like) 70 689 IPR011009 -
Prci1g1456 701 MobiDBLite consensus disorder prediction 1 33 - -
Prci1g1456 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Prci1g1456 701 SMART serkin_6 91 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1456 701 FunFam Os07g0541700 protein 170 251 - -
Prci1g1456 701 Pfam Protein tyrosine and serine/threonine kinase 93 243 IPR001245 GO:0004672|GO:0006468
Prci1g1456 701 ProSiteProfiles Protein kinase domain profile. 91 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1456 701 Gene3D Transferase(Phosphotransferase) domain 1 170 262 - -
Prci1g1456 701 Gene3D Transferase(Phosphotransferase) domain 1 533 677 - -
Prci1g1456 701 PANTHER OS07G0586332 PROTEIN 20 699 IPR044576 -
Prci1g1456 701 Coils Coil 465 485 - -
Prci1g1456 701 MobiDBLite consensus disorder prediction 672 701 - -
Prci1g1456 701 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1456 Prci-Chr1 33155329 33157793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1456 549 668 Receptor kinase-like Gene Family AT3G58690 35.714 1.49e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Prci1g1456 PK_Tyr_Ser-Thr 4.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1456 - - qsa:O6P43_005511 848.966