Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1452 ATGCCATCGAACTGTTTCTGCTGTTTCCTCGCGCAAGAAGAACACCAGCAAGTCAAAACAAGGGAAAACAATAATAGGGACTATCCATGGGAAATGTATACGCTAAAGGAGTTGCTTCGTGCAACAAACAATTTTCATCAAGATAACAAGATCGGAGAGGGTGGCTTTGGAAGTGTGTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGAGACTGAAGACGATGACTGCAAAAGCAGAGATGGAATTTGCAGTAGAAGTAGAAGTACTTGGAAGAGTGAGGCATAAGAATCTGTTGGGTCTGAGAGGATTCTATGCAGGTGGAGAAGAAAGACTCATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACACATCTTCACGGCCAGCTCGCTTCAAGTTGTCAGCTAGATTGGCCTAAACGAATGAGCATCGCCATCGGAGCAGCTGAAGGCTTAGCGTATCTGCATCATGAGGCGAGTCCTCACATTATACACAGAGACATAAAAGCGAGCAACGTGCTTCTGGACACTGAATTTCAAGCAAAAGTGGCTGATTTTGGTTTTGCAAAGCTCATACCTGAAGGTGTGAGCCATCTAACCACAAGAGTCAAAGGGACTTTGGGATATTTGGCGCCAGAATACGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTGTACAGCTTTGGGATTTTGCTTTTGGAGATCATAAGTGCGAAGAAACCGATAGAGAAGCTTCCAGGAGGAGTGAAAAGAGATATAGTTCAGTGGGTAACACCTTATGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGCTGAAGGGTAAGTTTGACATGGAGCAGCTGAAATCTGTGGTGGTTCTGGCTATGAAGTGCACCGACAGTAGCCCGGAGAAGAGGCCGAGTATGGCAGAGGTGGTGGAGTGGCTCAAGGGCTGCAGCGGCGGCGGCGGCGTTGTGCGGAGGAGGAAGGAGATTCCGGCCGTGAGGGACAACAATAATGGAGAAGTAGAAAACGACAAGAATGATAAGGACTATGAAGACCTGGGAAAGAGGCAATCCATGTTGAGAATACCAAGCGATAGATATAAAATAAGATGA 1119 0.4593 MPSNCFCCFLAQEEHQQVKTRENNNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLASSCQLDWPKRMSIAIGAAEGLAYLHHEASPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGKFDMEQLKSVVVLAMKCTDSSPEKRPSMAEVVEWLKGCSGGGGVVRRRKEIPAVRDNNNGEVENDKNDKDYEDLGKRQSMLRIPSDRYKIR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1452 372 ProSiteProfiles Protein kinase domain profile. 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1452 372 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1452 372 PANTHER OS01G0253100 PROTEIN 22 319 - -
Prci1g1452 372 MobiDBLite consensus disorder prediction 336 359 - -
Prci1g1452 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Prci1g1452 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 331 - -
Prci1g1452 372 Gene3D Transferase(Phosphotransferase) domain 1 121 320 - -
Prci1g1452 372 Pfam Protein kinase domain 45 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1452 372 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Prci1g1452 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 16 120 - -
Prci1g1452 372 Gene3D Phosphorylase Kinase; domain 1 7 120 - -
Prci1g1452 372 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1452 Prci-Chr1 33040563 33042420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1452 15 322 Receptor kinase-like Gene Family AT5G45780 44.025 1.20e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Prci1g1452 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1452 - - gmx:100817283 603.208