Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1413 ATGGGTAAAGGTCATGAGGAAGAAGAAGAGAATATGGCTGCTTGGCTTGTTGGTATAAATACCCTCAAGATTCAACCTTTCAAGCTCCCAGCCCTGGGTCCTCATGATGCCAGAATTCGAATCAAAGCTGTCGGTATATGTGGCAGTGATGTTCACTACTTCAAGAAAATGAGAAACGCACATAATATAATGAAAGAACCTATGGTAATGGGCCATGAATGTGCGGGGATCATAGAAGAAGTTGGTAGTGAGGTTAAGAATGTGGTACCTGGTGATCGTGTGGCTATTGAACCTGGGATTAGTTGCTGGCACTGTGATCTCTGCAAGCTAGGTCGATATAATTTATGCCCTAATATGAAGTTCTTTGCTAGTCCACCGGTTCATGGTTCTCTTGCTAAGCAGATAGTTCATCCTGCAAATCTCTGTTTCAAATTGCCAGACAATGTGAGCTTGGAAGAGGGAGCAATGTGTGAACCCTTGGGTGTCGGTGTTCATGCATGTCGTCGAGCTAACATTGGACCAGAAACAAATGTGTTGATCATTGGGGCAGGACCTATTGGACTTGTCACAATGCTCTCATGTCGTGCTTTTGGGGCACCCCGGATCGTCATTGTGGATGTGGATGAACATCGTTTATCTGTTGCAAAATCTCTTGGTGTAGATGAGACTGTTAAAGTTTCAGCAAACATTGAGGATGTGAGTGAAGAAGTTGAAGAGATACAAAAAGCAATGGGAAATAGGGTGGATCTTAGTTTCGACTGTGTTGGTTTCAACAAAACTATGACTACTGCATTGAGTGCCACTCGTGCAGGTGGCAAACTGTGCCTAGTTGGAATGGCTCAGACTCAAATGACTATTCCATTCACAACAGCTGCTGTGAGGGAAGTTGATGTGATAGGGATTTTCCGATACAAGAACACGTGGCCTCTGTGCCTGGAGTTTCTGAGGAGTAGGAAGATAGATGTGAGGCCTCTTATAACTCACAGGTTTGGGTTCTCTCAGAAGGAGGTGGAAGAAGCCTTTGAAACCAGTGCACGTGGTGGCAATGCTATTAAGGTCATGTTCAATCTGTAG 1074 0.4451 MGKGHEEEEENMAAWLVGINTLKIQPFKLPALGPHDARIRIKAVGICGSDVHYFKKMRNAHNIMKEPMVMGHECAGIIEEVGSEVKNVVPGDRVAIEPGISCWHCDLCKLGRYNLCPNMKFFASPPVHGSLAKQIVHPANLCFKLPDNVSLEEGAMCEPLGVGVHACRRANIGPETNVLIIGAGPIGLVTMLSCRAFGAPRIVIVDVDEHRLSVAKSLGVDETVKVSANIEDVSEEVEEIQKAMGNRVDLSFDCVGFNKTMTTALSATRAGGKLCLVGMAQTQMTIPFTTAAVREVDVIGIFRYKNTWPLCLEFLRSRKIDVRPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1413 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Prci1g1413 357 PANTHER SORBITOL DEHYDROGENASE 9 357 - -
Prci1g1413 357 Gene3D - 162 302 - -
Prci1g1413 357 FunFam Sorbitol dehydrogenase 162 302 - -
Prci1g1413 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 321 IPR036291 -
Prci1g1413 357 SUPERFAMILY GroES-like 12 184 IPR011032 -
Prci1g1413 357 SMART PKS_ER_names_mod 18 355 IPR020843 GO:0016491
Prci1g1413 357 Pfam Alcohol dehydrogenase GroES-like domain 34 145 IPR013154 -
Prci1g1413 357 CDD sorbitol_DH 13 356 IPR045306 GO:0016616
Prci1g1413 357 Pfam Zinc-binding dehydrogenase 185 315 IPR013149 -
Prci1g1413 357 Gene3D - 21 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1413 Prci-Chr1 31473523 31479030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1413 1 287 Monolignol Biosynthesis Gene Families AT4G37980 28.763 9.89e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1413 K00008 - mnt:21388822 605.905