Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1412 ATGGGTAAAGGTCATGAGGAAGAAGAAGAGAATATGGCTGCTTGGCTTGTTGGTATAAATACCCTCAAGATTCAACCTTTCAAGCTCCCAGCCCTGGGTCCTCATGATGCCAGAATTCGAATCAAAGCTGTCGGTATATGTGGCAGTGATGTTCACTACTTCAAGAAAATGAGAAACGCACATAATATAATGAAAGAACCTATGGTAATGGGCCATGAATGTGCGGGGATCATAGAAGAAGTTGGTAGTGAGGTTAAGAATGTGGTACCTGGTGATCGTGTGGCTATTGAACCTGGGATTAGTTGCTGGCACTGTGATCTCTGCAAGCTAGGTCGATATAATTTATGCCCTAATATGAAGTTCTTTGCTAGTCCACCGGTTCATGGTTCTCTTGCTAAGCAGATAGTTCATCCTGCAAATCTCTGTTTCAAATTGCCAGACAATGTGAGCTTGGAAGAGGGAGCAATGTGTGAACCCTTGGGTGTCGGTGTTCATGCATGTCGTCGAGCTAACATTGGACCAGAAACAAATGTGTTGATCATTGGGGCAGGACCTATTGGACTTGTCACAATGCTCTCATGTCGTGCTTTTGGGGCACCCCGGATCGTCATTGTGGATGTGGATGAACATCGTTTATCTGTTGCAAAATCTCTTGGTGTAGATGAGACTGTTAAAGTTTCAGCAAACATTGAGCAGGATGTGAGTGAAGAAGTTGAAGAGATACAAAAAGCAATGGGAAATAGGGTGGATCTTAGTTTCGACTGTGTTGGTTTCAACAAAACTATGACTACTGCATTGAGTGCCACTCGTGCAGGTGGCAAACTGTGCCTAGTTGGAATGGCTCAGACTCAAATGACTATTCCATTCACAACAGCTGCTGTGAGGGAAGTTGATGTGATAGGGATTTTCCGATACAAGAACACGTGGCCTCTGTGCCTGGAGTTTCTGAGGAGTAGGAAGATAGATGTGAGGCCTCTTATAACTCACAGGTTTGGGTTCTCTCAGAAGGAGGTGGAAGAAGCCTTTGAAACCAGTGCACGTGGTGGCAATGCTATTAAGGTCATGTTCAATCTGTAG 1077 0.4457 MGKGHEEEEENMAAWLVGINTLKIQPFKLPALGPHDARIRIKAVGICGSDVHYFKKMRNAHNIMKEPMVMGHECAGIIEEVGSEVKNVVPGDRVAIEPGISCWHCDLCKLGRYNLCPNMKFFASPPVHGSLAKQIVHPANLCFKLPDNVSLEEGAMCEPLGVGVHACRRANIGPETNVLIIGAGPIGLVTMLSCRAFGAPRIVIVDVDEHRLSVAKSLGVDETVKVSANIEQDVSEEVEEIQKAMGNRVDLSFDCVGFNKTMTTALSATRAGGKLCLVGMAQTQMTIPFTTAAVREVDVIGIFRYKNTWPLCLEFLRSRKIDVRPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1412 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Prci1g1412 358 PANTHER SORBITOL DEHYDROGENASE 9 358 - -
Prci1g1412 358 Pfam Zinc-binding dehydrogenase 185 316 IPR013149 -
Prci1g1412 358 Gene3D - 21 345 - -
Prci1g1412 358 SUPERFAMILY GroES-like 12 184 IPR011032 -
Prci1g1412 358 FunFam Sorbitol dehydrogenase 162 303 - -
Prci1g1412 358 Gene3D - 162 303 - -
Prci1g1412 358 Pfam Alcohol dehydrogenase GroES-like domain 34 145 IPR013154 -
Prci1g1412 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 322 IPR036291 -
Prci1g1412 358 CDD sorbitol_DH 13 357 IPR045306 GO:0016616
Prci1g1412 358 SMART PKS_ER_names_mod 18 356 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1412 Prci-Chr1 31473523 31479033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1412 1 288 Monolignol Biosynthesis Gene Families AT4G37980 28.667 1.24e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1412 K00008 - mnt:21388822 602.438