Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1394 ATGAAGATTGGATGGGACCTAAGAACTAGTCTTAATCGACGTTATATAGCATGGAAGAATTGGGATGACCCCTCTTTTGGAGACTTCACATTAGAGCTTACACATCACAATTATCCTGAAGTAATAGCTTGGCAAGGCCCAACAAAGTATATGAGGAGTGGCCCTTGGAATGGTGTCCGGTGGAGTGGTGACTCTCATGCATTGAAGAATCCACTGCATGAATCAAAGTTTGTGTGGAATAAGGATGAGGTTTATGGAACATATGATGTCAAAAACAAGTCACTGATTACAAGATTTGTCTACAACCAAACGTTGTACTCAGCAATGGACGTAATGTGGATTGAAGATAATCAAAGGTGGATTACATTTAGTTTTATGCCAATTGACAATTGTGATAGATATAATCGTTGTGGCCCAAATGGAATTTGCATCATTGGTGAGACACCAATATGCCAGTGCATGGCAGGATTCCTACCAAAATCACCCCAAAATTGGAATGCCATGTACTGGACTGAAGGATGTGTCCGCAATAAATCCTGGAGTTGCAAGGAAAATAACAAGGATTATTTTGTGAAATTTAGTGGGATGAAATTGCCAGATACTACATATTCTTGGGTTAATGCAAGTTTGACGCTTGAGGAATGCAAATCCAAATGCTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTCAGATATTCGTGCAGGAGGTAGTGGTTGTGCCCTATGGTTCCATGATTTAACCGATATAAGGCAGATTGCTTTTGAGGACCAGGATATATATATTCGTCTTGCCTCTGCACAAACAACTCAACATAATGAAGCTAATGGAAATAAGACAAAGGTGATTGCCGTAATAGTGACCACTGTGTTGGCTCTTGTAATGCTTTTGATCATTTTCTTTTACATTTACGGGCACGGAAGAAACTCTACAGCAAACAAGGAAAAAGGCTCAGAAGGAAATATGGAGCTGAAAACCTTGTTAGCAACAAACAATGAAGAAGTCTATGAAGGAAATATGGAGGTACATATTTTTGATCTTGCAGTAATAGCTAATGCTACTAATAACTTCTCATCTAAGATGAAGCTTGGCCAAGGTGGTTTTGGACCTGTATACAAGGGTATACTTCCAAATGGACAAGAAATTGCAGTGAAACAACTTTCACAAAACTCTCACCAAGGATTGGTTGAATTTAAGAATGAAGTCAAATTGTGTGCCAAACTTCAGCACCGCAATCTTGTTAAGGTTCTTGGTTGTTGCATTGAAGGAGAAGAGAAAATGCTCATATATGAATATATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTACTTCAAGTCAATTTCTAGATTGGCTCAAGCGCTTTCACATTATTTGTGGAATTGCTCGAGGACTTATGTATCTTCATCAAGATTCTAGATTAAGAATTATCCATAGAGACCTTAAGTTAAGTAATATATTATTAGATATTGAATTAAATCCAAAAATCTCAGATTTTGGATTGGCAAGAATATTTGGAGGAGATCAAATTGAAGATAATACAAGGCAAATAGTTGGCACATACGGTTATATGGCACCAGAATATGCAATTAATGGACTATTCTCTATCAAATCTGACGTATTCAGCTTTGGAGTAATACTGTTGGAAATGGCATGGAGATTGTGGAAGGAGGAAATCCCATTGAAATTGATTGACAAACATTTGGGGAAGTCTTATATTGAATCAGAGGTATTGAGATGCATCCATATCGGTCTTCTTTGTTTGCAATGCCATTCTGATGATAGGCCAAACATGACATCTGTGGTTGTAATGTTGAATAGTGAGAGTGCCTTGCCTCAACCTAAAGAACCTGGTTTCCTTCTGGAAACCATGCCAATGAGGGGAGAATTTTCTCCTAACAATCATGCTACTCCTTCAAGCAATGAAATATCTATCACGTTGGAAGCAAGATAA 1956 0.3783 MKIGWDLRTSLNRRYIAWKNWDDPSFGDFTLELTHHNYPEVIAWQGPTKYMRSGPWNGVRWSGDSHALKNPLHESKFVWNKDEVYGTYDVKNKSLITRFVYNQTLYSAMDVMWIEDNQRWITFSFMPIDNCDRYNRCGPNGICIIGETPICQCMAGFLPKSPQNWNAMYWTEGCVRNKSWSCKENNKDYFVKFSGMKLPDTTYSWVNASLTLEECKSKCWENCSCTAYANSDIRAGGSGCALWFHDLTDIRQIAFEDQDIYIRLASAQTTQHNEANGNKTKVIAVIVTTVLALVMLLIIFFYIYGHGRNSTANKEKGSEGNMELKTLLATNNEEVYEGNMEVHIFDLAVIANATNNFSSKMKLGQGGFGPVYKGILPNGQEIAVKQLSQNSHQGLVEFKNEVKLCAKLQHRNLVKVLGCCIEGEEKMLIYEYMPNKSLDSFIFGTSSQFLDWLKRFHIICGIARGLMYLHQDSRLRIIHRDLKLSNILLDIELNPKISDFGLARIFGGDQIEDNTRQIVGTYGYMAPEYAINGLFSIKSDVFSFGVILLEMAWRLWKEEIPLKLIDKHLGKSYIESEVLRCIHIGLLCLQCHSDDRPNMTSVVVMLNSESALPQPKEPGFLLETMPMRGEFSPNNHATPSSNEISITLEAR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1394 651 Gene3D Phosphorylase Kinase; domain 1 318 432 - -
Prci1g1394 651 ProSiteProfiles Protein kinase domain profile. 357 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1394 651 Pfam Protein tyrosine and serine/threonine kinase 360 553 IPR001245 GO:0004672|GO:0006468
Prci1g1394 651 Gene3D Hepatocyte Growth Factor 181 266 - -
Prci1g1394 651 CDD STKc_IRAK 363 607 - -
Prci1g1394 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 433 552 - -
Prci1g1394 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 181 264 - -
Prci1g1394 651 MobiDBLite consensus disorder prediction 631 651 - -
Prci1g1394 651 SMART ntp_6 185 264 IPR003609 -
Prci1g1394 651 Gene3D Transferase(Phosphotransferase) domain 1 433 616 - -
Prci1g1394 651 SMART serkin_6 357 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1394 651 Pfam PAN-like domain 182 250 IPR003609 -
Prci1g1394 651 SUPERFAMILY Protein kinase-like (PK-like) 342 622 IPR011009 -
Prci1g1394 651 SUPERFAMILY Hairpin loop containing domain-like 185 258 - -
Prci1g1394 651 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 321 432 - -
Prci1g1394 651 Pfam S-locus glycoprotein domain 52 161 IPR000858 GO:0048544
Prci1g1394 651 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
Prci1g1394 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Prci1g1394 651 ProSiteProfiles PAN/Apple domain profile. 182 265 IPR003609 -
Prci1g1394 651 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 597 - -
Prci1g1394 651 CDD PAN_AP_plant 181 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1394 Prci-Chr1 30771622 30774596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1394 278 646 Receptor kinase-like Gene Family AT4G05200 47.607 3.52e-114 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1g1394 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1394 - - pcin:129322539 1340.1