Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1392 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCAATCATCATCAAATTCTGGAATATTCTTTCAAGGGGATGGGCATTCGCAGAATGTGGTTAACTCTCACTTAAGCTCCTCTTTTGGTAACTCGTCTAATTCAATTCCTGGAACTGGGCATTCAAATCTGGGTCCAGTTTCTGGGGACATAAACAATGCAGTTTTAAACAGTGTGGGAAATTCTGGACCAAGTGTTGGAGCGAGTTCTTTAGTCACAGATGCGAACTCTGCATTTTCTGGAGGCCCTCATTTGCAGAGAAGTGCAAGTATTAACACAGACTCTTACTTACGTTTACCTGCATCACCAATGTCGTTCTCATCAAATAATGTTAGTATATCAGGTTCGTCTGTCATGGATGGTTCTTCTGTGTTACAGCAAAGCTCCCATCAGGACCAAGGTGTTCAACAATTGCAGCAGAACCAACAGCCTCCACTGGGTGCTTCAACTTCTACGTCTTTGCCAATGTCTCAAACTGGCCTGGCTTCACTCCCGGTGGGTGCACGAGGACCTGGTTCTTTCGTGCAGGATGCAAATAATATGTCCCATCTACAAAAGAAACCCCGGCTGGATATAAAGCAGGAGGATATATTGCAGCAGCAAGTAATGCAACAGATTCTTCAGAGACAGGACCCCATGCAGTTCCAGGGTCGTCATCCACAAATACAAGCCTTAATTCAGCAGCAGAGATTGAGGCAGCAGCAGCAGCAGCACCAGCAAATCCTTCAATCGATTCCACAGTTACAGCGAGCCCAATTACAACAACAGCAGCAACAACAGCTGCAATTGAGGCAGCAATTACAGCAACAAGCAATGCAGCCCATGCCTTCCATGAAACGTCCATATGACAGTGGTGTATGTGCCCGGCGATTGATGCAATACTTGTATCACCAAAGGCAACGTCCAAGTGATAATAGCATTGCCTATTGGAGGAAATTTGTGGCTGAATATTACTCTCCACGTGCAAAGAAACGGTGGTGCTTGTCATTGTATGATAATGTTGGACATGCTCTTGGTGTTTTTCCCCAAGCAGCCATGGATGCATGGCAGTGCGACATATGTCATTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTTCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTCTTAGACTTGCCTCGTGAGTGTAGATTTCCTTCTGGTGTAATGATGTTAGAGTATGGAAAAGCTGTTCAAGAAAGTGTCTACGAGCAGCTTCGAGTTGTTCGTGAGGGCCAACTTCGTATTATATTCACACAAGACTTGAAGATCTTATCTTGGGAATTTTGCGCCAGGCGTCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTCAATCAGTTGGTCCAGGTTGCACAAAAATGTCACAGTACAATTTCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAAACAAATAGCAATATGGTGTTCACTGCTGGGCGTCAGCTTGCTAAGAGTTTGGAGTTACAGTCACTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGGTGCTTGCAGATATCTGAGGTTGTAAATAGCATGAAAGATCTGATGGACTTTTGCCGGGAGCAGAATATTGGGGCAATTGAGGGCTTGAAAACTTATCCTCGCCAAGCAACAGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGTTAGAACAACTAGCAAGTGTTCAGGGTCTGCCGACTGACCGAAACACTCTCAATAAGCTTATGGCATTGCATCCTGGGTTGAACAATCAAATGAACAACAATCATAATATGGCTAATCGCGGTGCTTTAACTGGGCCAGCACAAGCTGCTTTAGCCCTGACCAACTACCAGAATCTTCTCATCAGGCAAAATTCTATGGGTTCAAATTCTACCTCGCTCCAGCGAGAAGGATCAACTTCCTTTAATAATTCGGCTCGGAGCCCATCTACAACCTTGCAAGGTTCTGCTACTGGTTTAATACCTGGCTCCATGCAGAATTTACCTGTTAGCAGTCTCTCAAATCCCCATCTAGCCCAACAGCAGCCGCAAAGCCAACTGCAACAACTTCAACAGCGCTCTCTAAGTCCCAATAACATGCTTCAACAAAGCCATTCACAGGGCTCTGAAGGAAGTAATGCTCTGCAACAGCAGATGTTCCAGCGACTGCTGCAAGAGGTATCAAATAACAGTGGCGGAGGAATGCTACCCCGGCCCCTTGCTGGAGCCAATGCAAATGGGAGTATGGCAAAGAATGGAGTAAATGGGGTCAGCGCCAATGTTTCAGGAACCAACGGACCGGCCCCCAGCAGGAGCAACAGTTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAACGGATTCAACCAGAGACCTGATATGCCACAGAATCTCCACTTACAAGAAGATGTGGTTCATAACATCGCCCGTGAATTCACAGATAATGGCTTCTTTAACAGTGATCTGGATGAGCACATGGGTTATGGCTGGAAGGCATGA 2559 0.458 MAPSRVAGGLAQSSSNSGIFFQGDGHSQNVVNSHLSSSFGNSSNSIPGTGHSNLGPVSGDINNAVLNSVGNSGPSVGASSLVTDANSAFSGGPHLQRSASINTDSYLRLPASPMSFSSNNVSISGSSVMDGSSVLQQSSHQDQGVQQLQQNQQPPLGASTSTSLPMSQTGLASLPVGARGPGSFVQDANNMSHLQKKPRLDIKQEDILQQQVMQQILQRQDPMQFQGRHPQIQALIQQQRLRQQQQQHQQILQSIPQLQRAQLQQQQQQQLQLRQQLQQQAMQPMPSMKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHALGVFPQAAMDAWQCDICHSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCHSTISESGSDGISQQDLQTNSNMVFTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREQNIGAIEGLKTYPRQATAAKLQMQKMQELEQLASVQGLPTDRNTLNKLMALHPGLNNQMNNNHNMANRGALTGPAQAALALTNYQNLLIRQNSMGSNSTSLQREGSTSFNNSARSPSTTLQGSATGLIPGSMQNLPVSSLSNPHLAQQQPQSQLQQLQQRSLSPNNMLQQSHSQGSEGSNALQQQMFQRLLQEVSNNSGGGMLPRPLAGANANGSMAKNGVNGVSANVSGTNGPAPSRSNSFKAASNSDSSAAGGNNGFNQRPDMPQNLHLQEDVVHNIAREFTDNGFFNSDLDEHMGYGWKA 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1392 852 MobiDBLite consensus disorder prediction 127 170 - -
Prci1g1392 852 Pfam LIM-domain binding protein 300 558 IPR029005 -
Prci1g1392 852 MobiDBLite consensus disorder prediction 772 815 - -
Prci1g1392 852 Coils Coil 852 852 - -
Prci1g1392 852 MobiDBLite consensus disorder prediction 127 188 - -
Prci1g1392 852 PANTHER LIM DOMAIN-BINDING PROTEIN 41 838 IPR029005 -
Prci1g1392 852 Coils Coil 260 283 - -
Prci1g1392 852 MobiDBLite consensus disorder prediction 744 763 - -
Prci1g1392 852 MobiDBLite consensus disorder prediction 644 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1392 Prci-Chr1 30688122 30699735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1392 286 565 C2H2 Transcription Factor Family AT1G43850 58.571 5.17e-111 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1392 - - pper:18787712 1184.47