LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1391	ATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCAATCATCATCAAATTCTGGAATATTCTTTCAAGGGGATGGGCATTCGCAGAATGTGGTTAACTCTCACTTAAGCTCCTCTTTTGGTAACTCGTCTAATTCAATTCCTGGAACTGGGCATTCAAATCTGGGTCCAGTTTCTGGGGACATAAACAATGCAGTTTTAAACAGTGTGGGAAATTCTGGACCAAGTGTTGGAGCGAGTTCTTTAGTCACAGATGCGAACTCTGCATTTTCTGGAGGCCCTCATTTGCAGAGAAGTGCAAGTTCGTCTGTCATGGATGGTTCTTCTGTGTTACAGCAAAGCTCCCATCAGGACCAAGGTGTTCAACAATTGCAGCAGAACCAACAGCCTCCACTGGGTGCTTCAACTTCTACGTCTTTGCCAATGTCTCAAACTGGCCTGGCTTCACTCCCGGTGGGTGCACGAGGACCTGGTTCTTTCGTGCAGGATGCAAATAATATGTCCCATCTACAAAAGAAACCCCGGCTGGATATAAAGCAGGAGGATATATTGCAGCAGCAAGTAATGCAACAGATTCTTCAGAGACAGGACCCCATGCAGTTCCAGGGTCGTCATCCACAAATACAAGCCTTAATTCAGCAGCAGAGATTGAGGCAGCAGCAGCAGCAGCACCAGCAAATCCTTCAATCGATTCCACAGTTACAGCGAGCCCAATTACAACAACAGCAGCAACAACAGCTGCAATTGAGGCAGCAATTACAGCAACAAGCAATGCAGCCCATGCCTTCCATGAAACGTCCATATGACAGTGGTGTATGTGCCCGGCGATTGATGCAATACTTGTATCACCAAAGGCAACGTCCAAGTGATAATAGCATTGCCTATTGGAGGAAATTTGTGGCTGAATATTACTCTCCACGTGCAAAGAAACGGTGGTGCTTGTCATTGTATGATAATGTTGGACATGCTCTTGGTGTTTTTCCCCAAGCAGCCATGGATGCATGGCAGTGCGACATATGTCATTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTTCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTCTTAGACTTGCCTCGTGAGTGTAGATTTCCTTCTGGTGTAATGATGTTAGAGTATGGAAAAGCTGTTCAAGAAAGTGTCTACGAGCAGCTTCGAGTTGTTCGTGAGGGCCAACTTCGTATTATATTCACACAAGACTTGAAGATCTTATCTTGGGAATTTTGCGCCAGGCGTCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTCAATCAGTTGGTCCAGGTTGCACAAAAATGTCACAGTACAATTTCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAAACAAATAGCAATATGGTGTTCACTGCTGGGCGTCAGCTTGCTAAGAGTTTGGAGTTACAGTCACTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGGTGCTTGCAGATATCTGAGGTTGTAAATAGCATGAAAGATCTGATGGACTTTTGCCGGGAGCAGAATATTGGGGCAATTGAGGGCTTGAAAACTTATCCTCGCCAAGCAACAGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGTTAGAACAACTAGCAAGTGTTCAGGGTCTGCCGACTGACCGAAACACTCTCAATAAGCTTATGGCATTGCATCCTGGGTTGAACAATCAAATGAACAACAATCATAATATGGCTAATCGCGGTGCTTTAACTGGGCCAGCACAAGCTGCTTTAGCCCTGACCAACTACCAGAATCTTCTCATCAGGCAAAATTCTATGGGTTCAAATTCTACCTCGCTCCAGCGAGAAGGATCAACTTCCTTTAATAATTCGGCTCGGAGCCCATCTACAACCTTGCAAGGTTCTGCTACTGGTTTAATACCTGGCTCCATGCAGAATTTACCTGTTAGCAGTCTCTCAAATCCCCATCTAGCCCAACAGCAGCCGCAAAGCCAACTGCAACAACTTCAACAGCGCTCTCTAAGTCCCAATAACATGCTTCAACAAAGCCATTCACAGGGCTCTGAAGGAAGTAATGCTCTGCAACAGCAGATGTTCCAGCGACTGCTGCAAGAGGTATCAAATAACAGTGGCGGAGGAATGCTACCCCGGCCCCTTGCTGGAGCCAATGCAAATGGGAGTATGGCAAAGAATGGAGTAAATGGGGTCAGCGCCAATGTTTCAGGAACCAACGGACCGGCCCCCAGCAGGAGCAACAGTTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAACGGATTCAACCAGAGACCTGATATGCCACAGAATCTCCACTTACAAGAAGATGTGGTTCATAACATCGCCCGTGAATTCACAGATAATGGCTTCTTTAACAGTGATCTGGATGAGCACATGGGTTATGGCTGGAAGGCATGA	2484	0.4614	MAPSRVAGGLAQSSSNSGIFFQGDGHSQNVVNSHLSSSFGNSSNSIPGTGHSNLGPVSGDINNAVLNSVGNSGPSVGASSLVTDANSAFSGGPHLQRSASSSVMDGSSVLQQSSHQDQGVQQLQQNQQPPLGASTSTSLPMSQTGLASLPVGARGPGSFVQDANNMSHLQKKPRLDIKQEDILQQQVMQQILQRQDPMQFQGRHPQIQALIQQQRLRQQQQQHQQILQSIPQLQRAQLQQQQQQQLQLRQQLQQQAMQPMPSMKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHALGVFPQAAMDAWQCDICHSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCHSTISESGSDGISQQDLQTNSNMVFTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREQNIGAIEGLKTYPRQATAAKLQMQKMQELEQLASVQGLPTDRNTLNKLMALHPGLNNQMNNNHNMANRGALTGPAQAALALTNYQNLLIRQNSMGSNSTSLQREGSTSFNNSARSPSTTLQGSATGLIPGSMQNLPVSSLSNPHLAQQQPQSQLQQLQQRSLSPNNMLQQSHSQGSEGSNALQQQMFQRLLQEVSNNSGGGMLPRPLAGANANGSMAKNGVNGVSANVSGTNGPAPSRSNSFKAASNSDSSAAGGNNGFNQRPDMPQNLHLQEDVVHNIAREFTDNGFFNSDLDEHMGYGWKA	827

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	32	55	-	-
	Prci1g1391	827	Pfam	LIM-domain binding protein	275	533	IPR029005	-
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	89	163	-	-
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	719	738	-	-
	Prci1g1391	827	Coils	Coil	235	258	-	-
	Prci1g1391	827	PANTHER	LIM DOMAIN-BINDING PROTEIN	41	813	IPR029005	-
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	619	705	-	-
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	89	145	-	-
	Prci1g1391	827	MobiDBLite	consensus disorder prediction	747	790	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1391	Prci-Chr1	30688122	30699735	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1391	261	540	C2H2 Transcription Factor Family	AT1G43850	58.571	2.35e-111	359

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1391	-		-	pper:18787712	1139.79